RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ZNF705GA8MUZ8 300 aaPredicted RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 SURF4O15260 269 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 NUDT21O43809 227 aaKnown RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
CHD4-201ENST00000357008 CHRNEQ04844 493 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 HYAL4Q2M3T9 481 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 NXNL2Q5VZ03 156 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 DPY19L4Q7Z388 723 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 LIX1LQ8IVB5 337 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 NLGN4XQ8N0W4 816 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 SLC6A20Q9NP91 592 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
CHD4-201ENST00000357008 DNAJC25-GNG10A0A024R161 153 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 GPR75O95800 540 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 TNK1Q13470 666 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 LRRC26Q2I0M4 334 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 PARS2Q7L3T8 475 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 OR13C2Q8NGS9 318 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 OR10K1Q8NGX5 313 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 C22orf15Q8WYQ4 148 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 SMIM14Q96QK8 99 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 OR5M11Q96RB7 305 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 B4DXG7 233 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 FUCA1P04066 466 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 GJA5P36382 358 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 EFNA3P52797 238 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 C18orf63Q68DL7 685 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 OR7E24Q6IFN5 339 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 IDO2Q6ZQW0 420 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 GPR155Q7Z3F1 870 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 L3MBTL4Q8NA19 623 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 BBS1Q8NFJ9 593 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 GHSRQ92847 366 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 UBQLN4Q9NRR5 601 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 SUSD2Q9UGT4 822 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 SULT2B1O00204 365 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 FBXO24O75426 580 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 WDPCPO95876 746 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 VEGFCP49767 419 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 FCN2Q15485 313 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 ADPRMQ3LIE5 342 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 OR51D1Q8NGF3 324 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 MIB2Q96AX9 1013 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 SLC19A3Q9BZV2 496 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 NXF5Q9H1B4 397 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 C8orf33Q9H7E9 229 aaPredicted RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 VSX1Q9NZR4 365 aaPredicted RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 BLACEA4D250 179 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 TMEM212A6NML5 194 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 MAN2B1O00754 1011 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 CSNK1A1P48729 337 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 SEC61A1P61619 476 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 GPLD1P80108 840 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 PRDX1Q06830 199 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 HMGN3Q15651 99 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 MRPL2Q5T653 305 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 ABHD4Q8TB40 342 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 TAS2R16Q9NYV7 291 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 ZNF223Q9UK11 482 aaPredicted RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 K7EPK0 472 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 CSO75390 466 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 PDGFAP04085 211 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 ARSAP15289 507 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 RPS15P62841 145 aaKnown RBP13.85□□□□□ -0.19
CHD4-201ENST00000357008 DSC1Q08554 894 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 GAB1Q13480 694 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 COX15Q7KZN9 410 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 TRAPPC6BQ86SZ2 158 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 FAM71E2Q8N5Q1 922 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 LGALS14Q8TCE9 139 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 ISL2Q96A47 359 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 CPNE7Q9UBL6 633 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 MOKQ9UQ07 419 aa13.85□□□□□ -0.19
CHD4-201ENST00000357008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 PCSK6P29122 969 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 ACY1Q03154 408 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 ARSJQ5FYB0 599 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 EXOSC6Q5RKV6 272 aaKnown RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 MBOAT2Q6ZWT7 520 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 FUNDC1Q8IVP5 155 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 FAM160A2Q8N612 972 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 LHX3Q9UBR4 397 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 CAMK2AQ9UQM7 478 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 OR2A25A4D2G3 310 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 ACOD1A6NK06 481 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 SHC1P29353 583 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 SLC9A3R2Q15599 337 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 NLRP8Q86W28 1048 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 ADOQ96SZ5 270 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TCEAL2Q9H3H9 227 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 GCM1Q9NP62 436 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 FAM212BQ9NTI7 297 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 ADAM23O75077 832 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 DDOSTP39656 456 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 P2RY2P41231 377 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 PLA2G7Q13093 441 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TECPR1Q7Z6L1 1165 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 PRR18Q8N4B5 295 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms