RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SPCS2Q15005 226 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF791Q3KP31 576 aaPredicted RBP15.67■□□□□ 0.1
VPS13B-201ENST00000355155 ARMCX4Q5H9R4 360 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 GRINAQ7Z429 371 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 PSD4Q8NDX1 1056 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 MGLLQ99685 303 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 TOR4AQ9NXH8 423 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 CDC14CA4D256 554 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 MT-ATP6P00846 226 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 FOXL2P58012 376 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 DYNC1I2Q13409 638 aaKnown RBP15.67■□□□□ 0.1
VPS13B-201ENST00000355155 SNTA1Q13424 505 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 IL10RAQ13651 578 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 EMC4Q5J8M3 183 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 OR52N1Q8NH53 320 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 ATOH1Q92858 354 aaPredicted RBP15.67■□□□□ 0.1
VPS13B-201ENST00000355155 MR1Q95460 341 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 OR5M11Q96RB7 305 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 MESP1Q9BRJ9 268 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 NMNAT2Q9BZQ4 307 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 OSGIN1Q9UJX0 560 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 HS3ST3B1Q9Y662 390 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 KPNA4O00629 521 aaPredicted RBP15.67■□□□□ 0.1
VPS13B-201ENST00000355155 TACR3P29371 465 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 TUBA1BP68363 451 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 BDH1Q02338 343 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 CHAF1BQ13112 559 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 DOC2BQ14184 412 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 SPHARQ15513 63 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 TUBA1AQ71U36 451 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 DYNC2LI1Q8TCX1 351 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 PTP4A1Q93096 173 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 SNX18Q96RF0 628 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 SH2D2AQ9NP31 389 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 A3GALT2U3KPV4 340 aa15.67■□□□□ 0.1
VPS13B-201ENST00000355155 CPAMD8Q8IZJ3 1885 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 TRAV27A0A087WT01 109 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 SLC22A31A6NKX4 558 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CCRL2O00421 344 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 TERTO14746 1132 aaKnown RBP15.66■□□□□ 0.1
VPS13B-201ENST00000355155 SLC2A10O95528 541 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 IFNGP01579 166 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 INHBBP09529 407 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 GP1BBP13224 206 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CPEP16870 476 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CSRP2Q16527 193 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 FAM122BQ7Z309 247 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 EGFL6Q8IUX8 553 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CPOQ8IVL8 374 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 GATSQ8NAP1 163 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 KLHDC3Q9BQ90 382 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 IFT27Q9BW83 186 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 GPR52Q9Y2T5 361 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 TRAV36DV7A0A075B6V5 113 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 PRR33A8MZF0 331 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 HCRTR2O43614 444 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 LIMS3P0CW19 117 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 LIMS4P0CW20 117 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CAPZA2P47755 286 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 ETV1P50549 477 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 LTBQ06643 244 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 POU4F2Q12837 409 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 ITGADQ13349 1161 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 SSX1Q16384 188 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 TIMM50Q3ZCQ8 353 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 SLC35D3Q5M8T2 416 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 NDUFB11Q9NX14 153 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 IL20RAQ9UHF4 553 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 CLEC2DQ9UHP7 191 aa15.66■□□□□ 0.1
VPS13B-201ENST00000355155 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 STK17BO94768 372 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 BCL10O95999 233 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 ZNF3P17036 446 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 WNT4P56705 351 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 TPBGQ13641 420 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 C6orf15Q6UXA7 325 aaPredicted RBP15.65■□□□□ 0.1
VPS13B-201ENST00000355155 NDUFAF7Q7L592 441 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 GALNT6Q8NCL4 622 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 TBC1D15Q8TC07 691 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 TMEM234Q8WY98 164 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 EDEM2Q9BV94 578 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 PTDSS2Q9BVG9 487 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 NDEL1Q9GZM8 345 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 TAS2R16Q9NYV7 291 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 CCDC187A0A096LP49 1063 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 RIIAD1A6NNX1 92 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 IGHMP01871 453 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 SLC25A1P53007 311 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 SF3A2Q15428 464 aaKnown RBP15.65■□□□□ 0.1
VPS13B-201ENST00000355155 H3F3CQ6NXT2 135 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 RAB11FIP2Q7L804 512 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 SLC37A3Q8NCC5 494 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 ARHGAP9Q9BRR9 750 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 TAS2R10Q9NYW0 307 aa15.65■□□□□ 0.1
VPS13B-201ENST00000355155 PTRH2Q9Y3E5 179 aaKnown RBP15.65■□□□□ 0.1
VPS13B-201ENST00000355155 PRR23D1E9PI22 279 aaPredicted RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 PPP1R3DO95685 299 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 PRR23D2P0DMB1 279 aaPredicted RBP15.64■□□□□ 0.09
VPS13B-201ENST00000355155 FOLR3P41439 243 aa15.64■□□□□ 0.09
VPS13B-201ENST00000355155 FBXW4P57775 412 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms