RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LYARQ9NX58 379 aaKnown RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 TSPAN4O14817 238 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CFDP00746 253 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GNRH1P01148 92 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 TYRP1P17643 537 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GDI1P31150 447 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CENPAP49450 140 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 ERVK-25P63136 954 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 EEF1A1P68104 462 aaKnown RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 EXOSC2Q13868 293 aaKnown RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 ARHGAP11BQ3KRB8 267 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 FAM109BQ6ICB4 259 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CMTM4Q8IZR5 234 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 LNX2Q8N448 690 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 MED30Q96HR3 178 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 FOXN4Q96NZ1 517 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 DDOQ99489 341 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 RAB11FIP5Q9BXF6 653 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 PITHD1Q9GZP4 211 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GHITMQ9H3K2 345 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CD93Q9NPY3 652 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 SLCO1C1Q9NYB5 712 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 NUBP2Q9Y5Y2 271 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CHURC1-FNTBB4DL54 471 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GPR171O14626 319 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 POU6F2P78424 691 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GPALPP1Q8IXQ4 340 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 RERGQ96A58 199 aaPredicted RBP13.28□□□□□ -0.28
CPSF7-201ENST00000340437 C10orf90Q96M02 699 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 ASB16Q96NS5 453 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 CCDC3Q9BQI4 270 aa13.28□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF593O00488 134 aaPredicted RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 FMO6PO60774 539 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 IFNGP01579 166 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 TFP02787 698 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 RAF1P04049 648 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 PDGFAP04085 211 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 EPXP11678 715 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 BTG1P62324 171 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 RUNX3Q13761 415 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 LGALSLQ3ZCW2 172 aaPredicted RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 ZNF511Q8NB15 262 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 BRIX1Q8TDN6 353 aaKnown RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 ZNRF4Q8WWF5 429 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 RASD2Q96D21 266 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 TSPAN10Q9H1Z9 355 aaPredicted RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 ANKRD19PQ9H560 264 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 SRA1Q9HD15 236 aaKnown RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 RDH8Q9NYR8 311 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 PHF11Q9UIL8 331 aa13.27□□□□□ -0.28
CPSF7-201ENST00000340437 ARHGEF17Q96PE2 2063 aaPredicted RBP13.27□□□□□ -0.28
CPSF7-201ENST00000340437 A0A0G2JK05 382 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 A0A1B0GTH9 108 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 ADAM11O75078 769 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 SIX6O95475 246 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 FBXO45P0C2W1 286 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 NID1P14543 1247 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 BLVRAP53004 296 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 FIGLAQ6QHK4 219 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 APOOLQ6UXV4 268 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 Q6ZTK2 550 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 RTTNQ86VV8 2226 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 MEIOBQ8N635 442 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 OR52R1Q8NGF1 315 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 OR52I2Q8NH67 350 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 NR4A3Q92570 626 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 PELI1Q96FA3 418 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 THAP10Q9P2Z0 257 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-201ENST00000340437 DAPP1Q9UN19 280 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 H7C1C5 153 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 PLPP2O43688 288 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 RGS11O94810 467 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 RLN1P04808 185 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 AP2S1P53680 142 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-201ENST00000340437 LCN6P62502 163 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 PPP2CBP62714 309 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 PPP2CAP67775 309 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 KCNAB1Q14722 419 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 PON3Q15166 354 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 ZPLD1Q8TCW7 415 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 WDR89Q96FK6 387 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-201ENST00000340437 MGAT4CQ9UBM8 478 aa13.27□□□□□ -0.29
CPSF7-201ENST00000340437 KIF26AQ9ULI4 1882 aaPredicted RBP13.27□□□□□ -0.29
CPSF7-201ENST00000340437 MCIDASD6RGH6 385 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 NUPL2O15504 423 aaKnown RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ANXA7P20073 488 aaKnown RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 LCN1P31025 176 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ADH7P40394 386 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 NRG3P56975 720 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 SIRPAP78324 504 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 DUSP8Q13202 625 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 TMEM255AQ5JRV8 349 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 RTL4Q6ZR62 310 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 OR2T4Q8NH00 348 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 OR1E3Q8WZA6 343 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 SCMH1Q96GD3 660 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms