RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CLDN12P56749 244 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 BTG2P78543 158 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 LBHQ53QV2 105 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 ARSJQ5FYB0 599 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 ARSIQ5FYB1 569 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 RPS26P11Q5JNZ5 115 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM220Q6QAJ8 160 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 SMARCD3Q6STE5 483 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 HIST2H3AQ71DI3 136 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 OR6V1Q8N148 313 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 BBS1Q8NFJ9 593 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 OR1J4Q8NGS1 313 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 LGALS14Q8TCE9 139 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 THAP3Q8WTV1 239 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 SLC25A43Q8WUT9 341 aaPredicted RBP8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 SMIM4Q8WVI0 70 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 SLC25A38Q96DW6 304 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 WDCPQ9H6R7 721 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 EGLN3Q9H6Z9 239 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 CBLCQ9ULV8 474 aa8.94□□□□□ -0.98
PTCHD4-201ENST00000339488 DSPPQ9NZW4 1301 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM238LA0A1B0GVL6 79 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM129A0AVI4 362 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 RNF222A6NCQ9 220 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM235A6NFC5 223 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 YJEFN3A6XGL0 299 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF705GA8MUZ8 300 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MANBAO00462 879 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MAFKO60675 156 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 RGS9O75916 674 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TBX6O95947 436 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 RAC2P15153 192 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MYOGP15173 224 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 HOXB6P17509 224 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ACVR1BP36896 505 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MTNR1AP48039 350 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 PRKXP51817 358 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 LIN54Q6MZP7 749 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MPZL3Q6UWV2 235 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF620Q6ZNG0 422 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ARHGAP12Q8IWW6 846 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 BEST3Q8N1M1 668 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 C19orf47Q8N9M1 422 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 OR2A12Q8NGT7 310 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 NEK7Q8TDX7 302 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ECHDC3Q96DC8 303 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 FCRL4Q96PJ5 515 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 PARP12Q9H0J9 701 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM27Q9HBJ8 222 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TMEM45AQ9NWC5 275 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 PCDHB11Q9Y5F2 797 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TRPV2Q9Y5S1 764 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 PLXNA1Q9UIW2 1896 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 A0A0B4J2A0 478 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ANTXRLA6NF34 631 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 HSPA12AO43301 675 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 RNF13O43567 381 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 DPM1O60762 260 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 SMPD2O60906 423 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 CLDN11O75508 207 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ITGA5P08648 1049 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MAPK3P27361 379 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 MAT2AP31153 395 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 IL2RGP31785 369 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 CEACAM8P31997 349 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ATP6V1E1P36543 226 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 LIMS1P48059 325 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 STC1P52823 247 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 RING1Q06587 406 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 LAMTOR4Q0VGL1 99 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 TSPAN31Q12999 210 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 HJURPQ8NCD3 748 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF671Q8TAW3 534 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 C16orf78Q8WTQ4 265 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF385AQ96PM9 386 aaKnown RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 DERL3Q96Q80 235 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 GPA33Q99795 319 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 NKX3-1Q99801 234 aaPredicted RBP8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 SELENOIQ9C0D9 397 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 SLC23A2Q9UGH3 650 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 SHPKQ9UHJ6 478 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 GAB2Q9UQC2 676 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 COLEC10Q9Y6Z7 277 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 GBF1Q92538 1859 aa8.93□□□□□ -0.98
PTCHD4-201ENST00000339488 EFCAB14O75071 495 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 GPR32O75388 356 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 DDNO94850 711 aaPredicted RBP8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 RPS15P62841 145 aaKnown RBP8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 CLN3Q13286 438 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 RGNQ15493 299 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 MST1LQ2TV78 715 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 TRIM40Q6P9F5 258 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 TMPPEQ6ZT21 453 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 PARGQ86W56 976 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 NRROSQ86YC3 692 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 HORMAD2Q8N7B1 307 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF321PQ8N8H1 164 aa8.92□□□□□ -0.98
PTCHD4-201ENST00000339488 ZNF485Q8NCK3 441 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms