RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 CLPXO76031 633 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 UMODP07911 640 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LIMS3P0CW19 117 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LIMS4P0CW20 117 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ZNF3P17036 446 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 WNT4P56705 351 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 RAB15P59190 212 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 PRPS1P60891 318 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LSM3P62310 102 aaKnown RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ITGADQ13349 1161 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 CBFBQ13951 182 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ISXQ2M1V0 245 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 TIMM50Q3ZCQ8 353 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ANKDD1AQ495B1 522 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 OR5M3Q8NGP4 307 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ELP5Q8TE02 316 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 KISS1RQ969F8 398 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ZNF649Q9BS31 505 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 MMP25Q9NPA2 562 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 CHCHD3Q9NX63 227 aaKnown RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 MYOTQ9UBF9 498 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 PCDHGB6Q9Y5F9 930 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 C17orf51A8MQB3 221 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 MCIDASD6RGH6 385 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LRRN3E7EW58 273 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 WWP2O00308 870 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ARPC3O15145 178 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 SCO2O43819 266 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 IFNGP01579 166 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ZNF806P0C7X5 589 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 SLC2A5P22732 501 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 FBXW4P57775 412 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 TUBA1BP68363 451 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 TOMM34Q15785 309 aaPredicted RBP12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LYPD8Q6UX82 237 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 LINC00299Q6ZSB3 139 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 TUBA1AQ71U36 451 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 NAXDQ8IW45 347 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 SLC37A3Q8NCC5 494 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ZNF485Q8NCK3 441 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 PSD4Q8NDX1 1056 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 B4GALNT2Q8NHY0 566 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 GPR119Q8TDV5 335 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 DEPDC7Q96QD5 511 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 HCAR1Q9BXC0 346 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 ZNF700Q9H0M5 742 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 OR51E2Q9H255 320 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 KLHL21Q9UJP4 597 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 HIF3AQ9Y2N7 669 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 B3GALT1Q9Y5Z6 326 aa12.97□□□□□ -0.33
CHEK2-201ENST00000328354 CPAMD8Q8IZJ3 1885 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 CCDC182A6NF36 153 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 SLC22A31A6NKX4 558 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 IDH3BO43837 385 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 APOL3O95236 402 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 INHBBP09529 407 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 TSPAN19P0C672 248 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 ASAH2BP0C7U1 165 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 ITPKBP27987 946 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 TMED10P49755 219 aaKnown RBP12.96□□□□□ -0.33
CHEK2-201ENST00000328354 CLK1P49759 484 aaKnown RBP12.96□□□□□ -0.33
CHEK2-201ENST00000328354 SUMO3P55854 103 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-201ENST00000328354 CRMP1Q14194 572 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 OR4F15Q8NGB8 312 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 OR2Y1Q8NGV0 311 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 THAP3Q8WTV1 239 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-201ENST00000328354 ZHX1-C8orf76Q96EF9 292 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 ERMAPQ96PL5 475 aaPredicted RBP12.96□□□□□ -0.33
CHEK2-201ENST00000328354 ZPBPQ9BS86 351 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 MED20Q9H944 212 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 NDUFB11Q9NX14 153 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 HAO2Q9NYQ3 351 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
CHEK2-201ENST00000328354 RIF1Q5UIP0 2472 aaKnown RBP12.95□□□□□ -0.34
CHEK2-201ENST00000328354 IGHV1-45A0A0A0MS14 117 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 A0A1W2PQ72 361 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 DKK1O94907 266 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 GP1BBP13224 206 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 APEHP13798 732 aaKnown RBP12.95□□□□□ -0.34
CHEK2-201ENST00000328354 CPEP16870 476 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 NOS3P29474 1203 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 DLX5P56178 289 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 E2F1Q01094 437 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 LTBQ06643 244 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 QPRTQ15274 297 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 MOGQ16653 247 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 DGUOKQ16854 277 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 DCAF12Q5T6F0 453 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 GDPGP1Q6ZNW5 385 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 USP43Q70EL4 1123 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 SHFQ7M4L6 423 aa12.95□□□□□ -0.34
CHEK2-201ENST00000328354 SLC15A4Q8N697 577 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms