RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 SNTA1Q13424 505 aa5.71□□□□□ -1.49
PRKDC-201ENST00000314191 MELKQ14680 651 aa5.71□□□□□ -1.49
PRKDC-201ENST00000314191 AKAP1Q92667 903 aaKnown RBP eCLIP5.71□□□□□ -1.49
PRKDC-201ENST00000314191 OPALINQ96PE5 141 aa5.71□□□□□ -1.49
PRKDC-201ENST00000314191 OR6C1Q96RD1 312 aa5.71□□□□□ -1.49
PRKDC-201ENST00000314191 ABCA1O95477 2261 aa5.71□□□□□ -1.49
PRKDC-201ENST00000314191 DCDC2BA2VCK2 349 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 HYAL3O43820 417 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OR2T1O43869 369 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 IL7P13232 177 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CASRP41180 1078 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF620Q6ZNG0 422 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CEP76Q8TAP6 659 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 SLC2A12Q8TD20 617 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF431Q8TF32 576 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ITFG2Q969R8 447 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 FCRL1Q96LA6 429 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 IFT46Q9NQC8 304 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 DHDHQ9UQ10 334 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF337Q9Y3M9 751 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NTN1O95631 604 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 AP2S1P53680 142 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 MAB21L1Q13394 359 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 GPBAR1Q8TDU6 330 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 SESN1Q9Y6P5 492 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CHD4Q14839 1912 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TMEM72A0PK05 275 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NID1P14543 1247 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 PYHIN1Q6K0P9 492 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 KIRREL2Q6UWL6 708 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TMED4Q7Z7H5 227 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 PIAS4Q8N2W9 510 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NXF5Q9H1B4 397 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TOXO94900 526 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 HTR1FP30939 366 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CTF1Q16619 201 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TMEM69Q5SWH9 247 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 SLC35D2Q76EJ3 337 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OR4C15Q8NGM1 316 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CDCA4Q9BXL8 241 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 PAQR5Q9NXK6 330 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TMED7-TICAM2A0A0A6YYA0 188 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NPIPA2E9PIF3 369 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NPIPA3F8WFD2 350 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 G3V3Y1 287 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 DOK2O60496 412 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ITGA5P08648 1049 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ITGA3P26006 1051 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 POU3F1Q03052 451 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 EEF1A2Q05639 463 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 RNASE11Q8TAA1 199 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TMED7Q9Y3B3 224 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 HSPB11Q9Y547 144 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 EFCAB7A8K855 629 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NSA2O95478 260 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OR3A3P47888 321 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OR3A2P47893 321 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OTPQ5XKR4 325 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 SYT9Q86SS6 491 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 NT5CQ8TCD5 201 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 STT3BQ8TCJ2 826 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CHPT1Q8WUD6 406 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TM9SF4Q92544 642 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF775Q96BV0 537 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CHMP1AQ9HD42 196 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 EPOPA6NHQ4 379 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 LRRTM2O43300 516 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CSTBP04080 98 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 PEBP1P30086 187 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TSSK2Q96PF2 358 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 UPB1Q9UBR1 384 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 DOCK9Q9BZ29 2069 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 METTL21EPA6NDL7 271 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 MBTPS2O43462 519 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 THBS1P07996 1170 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 PCBP3P57721 371 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 TEKQ02763 1124 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 CELF2-AS1Q8N7Q2 184 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 OR4D11Q8NGI4 311 aa5.71□□□□□ -1.5
PRKDC-201ENST00000314191 FARSAQ9Y285 508 aaKnown RBP5.71□□□□□ -1.5
PRKDC-201ENST00000314191 ZNF43P17038 809 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 SLC18B1Q6NT16 456 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 QSOX2Q6ZRP7 698 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 FCAMRQ8WWV6 532 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 EDAQ92838 391 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 YIPF6Q96EC8 236 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 KDM4EB2RXH2 506 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-201ENST00000314191 SELENOFO60613 162 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 EFEMP2O95967 443 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 SYT13Q7L8C5 426 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 IL22RA1Q8N6P7 574 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 OR7G1Q8NGA0 311 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 OR10A4Q9H209 315 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 SYPP08247 313 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 GTF2F2P13984 249 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 GABRA5P31644 462 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 TGM4P49221 684 aa5.7□□□□□ -1.5
PRKDC-201ENST00000314191 AFF3P51826 1226 aaKnown RBP5.7□□□□□ -1.5
PRKDC-201ENST00000314191 EFR3AQ14156 821 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms