RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 H2AFY2Q9P0M6 372 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-201ENST00000300302 WARS2Q9UGM6 360 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-201ENST00000300302 FBXL4Q9UKA2 621 aa14.3□□□□□ -0.12
HERPUD1-201ENST00000300302 SDK2Q58EX2 2172 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 M0R3G1 203 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 RAD1O60671 282 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 INMTO95050 263 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 DCKP27707 260 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NOS3P29474 1203 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ST13P50502 369 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 LIMK1P53667 647 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 PRPS1P60891 318 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 FOXK2Q01167 660 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NHLH1Q02575 133 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 SNTA1Q13424 505 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ZNF74Q16587 644 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ANKDD1AQ495B1 522 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 KLHL22Q53GT1 634 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 GPR107Q5VW38 600 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 SLC46A3Q7Z3Q1 461 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 TMPRSS12Q86WS5 348 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 CRELD1Q96HD1 420 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 TMEM80Q96HE8 168 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ENKD1Q9H0I2 346 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 CDCP1Q9H5V8 836 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NANSQ9NR45 359 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 CMC2Q9NRP2 79 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 WIF1Q9Y5W5 379 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 C2orf72A6NCS6 295 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 RIIAD1A6NNX1 92 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 TRMUO75648 421 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 PEPDP12955 493 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 PSMB9P28065 219 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 GP2P55259 537 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 EGR4Q05215 589 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 FHL1Q13642 323 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 SYT6Q5T7P8 510 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 UBE2UQ5VVX9 321 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NXNL2Q5VZ03 156 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 OR5M10Q6IEU7 315 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ARHGAP11AQ6P4F7 1023 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 POMZP3Q6PJE2 187 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 LSRQ86X29 649 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 RAB43Q86YS6 212 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ARMC10Q8N2F6 343 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 LRRC17Q8N6Y2 441 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 ISOC1Q96CN7 298 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NMD3Q96D46 503 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 SECISBP2Q96T21 854 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 NDEL1Q9GZM8 345 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 P4HTMQ9NXG6 502 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 COMMD3-BMI1R4GMX3 469 aa14.29□□□□□ -0.12
HERPUD1-201ENST00000300302 WDFY3Q8IZQ1 3526 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 IGLV3-32A0A0A0MS00 114 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TMED7-TICAM2A0A0A6YYA0 188 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 MAN1A2O60476 641 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 IFNGP01579 166 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 HK1P19367 917 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CCNA2P20248 432 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 RPL4P36578 427 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CASP3P42574 277 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 MTNR1AP48039 350 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TMBIM6P55061 237 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CDH11P55287 796 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 MLF1P58340 268 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 RPS4XP62701 263 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CHAF1BQ13112 559 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 AADACL4Q5VUY2 407 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 BICRALQ6AI39 1079 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TMEM81Q6P7N7 255 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 C5orf46Q6UWT4 87 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 IL20RBQ6UXL0 311 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 DPY19L2P2Q6ZN68 376 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CXXC5Q7LFL8 322 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 GID4Q8IVV7 300 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TMEM156Q8N614 296 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TSC22D3Q99576 134 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 CPNE5Q9HCH3 593 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 MED11Q9P086 117 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TMED7Q9Y3B3 224 aa14.28□□□□□ -0.12
HERPUD1-201ENST00000300302 TRAV36DV7A0A075B6V5 113 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 A8MVM7 634 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 LRRN3E7EW58 273 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 TERTO14746 1132 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 SUSD5O60279 629 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 SLC2A10O95528 541 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 PPP1R3DO95685 299 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 HIST1H2ABP04908 130 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 ZNF3P17036 446 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 CSRP1P21291 193 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 CD82P27701 267 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 PTGDSP41222 190 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 ZNF41P51814 821 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 RAB40BQ12829 278 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 IRF3Q14653 427 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 SLC35F1Q5T1Q4 408 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 FCRLBQ6BAA4 426 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 B3GNT6Q6ZMB0 384 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 HIST3H2AQ7L7L0 130 aa14.27□□□□□ -0.12
HERPUD1-201ENST00000300302 MARCH9Q86YJ5 346 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms