RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 OR51J1Q9H342 316 aa16.87■□□□□ 0.29
PDLIM3-201ENST00000284767 TRIM36Q9NQ86 728 aa16.87■□□□□ 0.29
PDLIM3-201ENST00000284767 KLHL28Q9NXS3 571 aa16.87■□□□□ 0.29
PDLIM3-201ENST00000284767 COPZ2Q9P299 210 aa16.87■□□□□ 0.29
PDLIM3-201ENST00000284767 CSNK1G3Q9Y6M4 447 aa16.87■□□□□ 0.29
PDLIM3-201ENST00000284767 TRAV6A0A075B6T7 132 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PDGFAP04085 211 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PAICSP22234 425 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 TRHRP34981 398 aaPredicted RBP16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 GPR4P46093 362 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 KCNAB1Q14722 419 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 SFXN4Q6P4A7 337 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 CPOQ8IVL8 374 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 NKAIN4Q8IVV8 208 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 OR8H3Q8N146 312 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 TOR1AIP2Q8NFQ8 470 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 FAM174AQ8TBP5 190 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 HGDQ93099 445 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PEX11GQ96HA9 241 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 AHCYL2Q96HN2 611 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 ALG8Q9BVK2 526 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 NLGN3Q9NZ94 848 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 TGFBR3LH3BV60 316 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 FOXS1O43638 330 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 SOX30O94993 753 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PEPDP12955 493 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PRKAR1BP31321 381 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PRICKLE4Q2TBC4 344 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 ZC3H14Q6PJT7 736 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 PLEKHM3Q6ZWE6 761 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 HEXA-AS1Q9H8Q6 139 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 NTMQ9P121 344 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 RASD1Q9Y272 281 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 SIRT4Q9Y6E7 314 aaPredicted RBP16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 SPACA6W5XKT8 324 aa16.86■□□□□ 0.29
PDLIM3-201ENST00000284767 K7ESF4 209 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SLC2A10O95528 541 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 TCRBP04435 133 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SHC1P29353 583 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 MGAT2Q10469 447 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 GPR68Q15743 365 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 MANEAQ5SRI9 462 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 HEPHL1Q6MZM0 1159 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 IL20RBQ6UXL0 311 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 KRT74Q7RTS7 529 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SORCS2Q96PQ0 1159 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SOHLH2Q9NX45 425 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 C19orf53Q9UNZ5 99 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 TEX13CA0A0J9YWL9 993 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 A0A1B0GVI7 797 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 LMO7DNF2Z398 122 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 HRKO00198 91 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 OR5F1O95221 314 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 ATP1B1P05026 303 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 HNRNPKP61978 463 aaKnown RBP eCLIP16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 PRTGQ2VWP7 1150 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SLC36A2Q495M3 483 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 SAMD14Q8IZD0 417 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 LRRC20Q8TCA0 184 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 HSD17B8Q92506 261 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 ABHD1Q96SE0 405 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 KRCC1Q9NPI7 259 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 TMEM184BQ9Y519 407 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 UNC13CQ8NB66 2214 aa16.85■□□□□ 0.29
PDLIM3-201ENST00000284767 GCGRP47871 477 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 CXCL12P48061 93 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 RAG2P55895 527 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 RAB38P57729 211 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 RGS8P57771 180 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 KLHL12Q53G59 568 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 FIGNL1Q6PIW4 674 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 HDDC2Q7Z4H3 204 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 GDF7Q7Z4P5 450 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 OR11H4Q8NGC9 324 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 OR5W2Q8NH69 310 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 FN3KQ9H479 309 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 INPP5EQ9NRR6 644 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 WDR45Q9Y484 360 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 A0A1B0GVT2 93 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 A0A1W2PPC1 479 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 PIAS2O75928 621 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 OR1D5P58170 312 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 BTG2P78543 158 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 MAPK14Q16539 360 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 MEPCEQ7L2J0 689 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 TRMT10AQ8TBZ6 339 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 ADAMTS14Q8WXS8 1223 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SLC41A3Q96GZ6 507 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SAMD8Q96LT4 415 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 SDF2Q99470 211 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 TIMP4Q99727 224 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 ERVMER34-1Q9H9K5 563 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 ARID1BQ8NFD5 2236 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 FZD7O75084 574 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 IFNA7P01567 189 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 HSF2Q03933 536 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 DUSP8Q13202 625 aa16.84■□□□□ 0.29
PDLIM3-201ENST00000284767 GALEQ14376 348 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms