RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 C10orf90Q96M02 699 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CCNL2Q96S94 520 aaPredicted RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 FAM186AA6NE01 2351 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 ZFC3H1O60293 1989 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 TRAV36DV7A0A075B6V5 113 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CD8B2A6NJW9 211 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 KHDRBS3O75525 346 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 C1QCP02747 245 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CD8BP10966 210 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 WNT4P56705 351 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CSNK2A1P68400 391 aaPredicted RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CEACAM19Q7Z692 300 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 SAP25Q8TEE9 199 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 PPP1R14AQ96A00 147 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 UBQLN3Q9H347 655 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CDHR4A6H8M9 788 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 H7C1C5 153 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CBX7O95931 251 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 CRABP1P29762 137 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 EVI2BP34910 448 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 SLC1A3P43003 542 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 NCS1P62166 190 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 LCN6P62502 163 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 EEF1A1P68104 462 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 PSPHP78330 225 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 ZNF404Q494X3 552 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 TP53I3Q53FA7 332 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 OR5M1Q8NGP8 315 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 ZNF764Q96H86 408 aaPredicted RBP13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 PITX2Q99697 317 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 MCUBQ9NWR8 336 aa13.3□□□□□ -0.28
PDLIM2-201ENST00000265810 DDAH2O95865 285 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 DUSP2Q05923 314 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 TAB1Q15750 504 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 GRINAQ7Z429 371 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 JAGN1Q8N5M9 183 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 MEIOBQ8N635 442 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 GPR32P1Q8NGA4 272 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 A6NIZ1 184 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 A8MVM7 634 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 GADD45AP24522 165 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 RAP1BP61224 184 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 RAP1AP62834 184 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 CRMP1Q14194 572 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 KLHL26Q53HC5 615 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 GPR139Q6DWJ6 353 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 RHOXF1Q8NHV9 184 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 TM4SF19Q96DZ7 209 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 CNOT2Q9NZN8 540 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 PCDHGA6Q9Y5G7 932 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 PCDHGA5Q9Y5G8 931 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 SPTA1P02549 2419 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 A0A1B0GVI7 797 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 KIAA0513O60268 411 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 FOXK2Q01167 660 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 GLO1Q04760 184 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 SLC18B1Q6NT16 456 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 C16orf47Q6ZP98 133 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 SLC35F2Q8IXU6 374 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 KDM8Q8N371 416 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 NMNAT3Q96T66 252 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 PAK1IP1Q9NWT1 392 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 YARS2Q9Y2Z4 477 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 B3GALT1Q9Y5Z6 326 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 ASXL3Q9C0F0 2248 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 SOX3P41225 446 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 RIDAP52758 137 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 DNASE1L3Q13609 305 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 HES3Q5TGS1 186 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 SLX4IPQ5VYV7 408 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 NEK7Q8TDX7 302 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 LHX9Q9NQ69 397 aa13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 EXO1Q9UQ84 846 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-201ENST00000265810 TFAP2AP05549 437 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 DRD5P21918 477 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 EPHA2P29317 976 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 PRKXP51817 358 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 HNRNPA0Q13151 305 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 ZNF681Q96N22 645 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 MBOAT4Q96T53 435 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 SARGQ9BW04 601 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 PRKYO43930 277 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 ZFP36L2P47974 494 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 ISL1P61371 349 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 EIF3IQ13347 325 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 HIST1H2AAQ96QV6 131 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 GPR55Q9Y2T6 319 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 SLC6A5Q9Y345 797 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 CIB4A0PJX0 185 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 HRKO00198 91 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 TFECO14948 347 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 CLPXO76031 633 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 ABCD3P28288 659 aa13.28□□□□□ -0.28
PDLIM2-201ENST00000265810 MSX1P28360 303 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms