RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 LTB4RQ15722 352 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 MDGA2Q7Z553 956 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 GABARAPL3Q9BY60 117 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 OPA3Q9H6K4 179 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 C12orf10Q9HB07 376 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 ZNF286AQ9HBT8 521 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 LOC100289279A0A1B0GTE1 492 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 F2P00734 622 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 HTR2CP28335 458 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CNN3Q15417 329 aaKnown RBP7.69□□□□□ -1.18
APOB-201ENST00000233242 OR4K15Q8NH41 348 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 MZB1Q8WU39 189 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 GHSRQ92847 366 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 EGLN3Q9H6Z9 239 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 BTBD17A6NE02 478 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 PAX6P26367 422 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 TAGLN2P37802 199 aaKnown RBP7.69□□□□□ -1.18
APOB-201ENST00000233242 LCN10Q6JVE6 187 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 LSMEM2Q8N112 164 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 APH1BQ8WW43 257 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 TGIF2Q9GZN2 237 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 HRASLS2Q9NWW9 162 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 MUTYHQ9UIF7 546 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 C17orf112F2Z3M2 114 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CBLP22681 906 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 P2RX3P56373 397 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CLDN20P56880 219 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 HBA1P69905 142 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 RPE65Q16518 533 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CREB3L4Q8TEY5 395 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 INIPQ9NRY2 104 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 JTBO76095 146 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 C18orf21Q32NC0 220 aaPredicted RBP7.69□□□□□ -1.18
APOB-201ENST00000233242 SERPINA12Q8IW75 414 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 OR1E3Q8WZA6 343 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 ZNF629Q9UEG4 869 aaPredicted RBP7.69□□□□□ -1.18
APOB-201ENST00000233242 IGKV6-21A0A0C4DH24 114 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 SNRPGP15A8MWD9 76 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CALCBP10092 127 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 SLC22A6Q4U2R8 563 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 C5orf46Q6UWT4 87 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 P4HA3Q7Z4N8 544 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CRYGNQ8WXF5 182 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 ADAM19Q9H013 955 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 ZNF587BE7ETH6 402 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CNOT4O95628 575 aaKnown RBP7.69□□□□□ -1.18
APOB-201ENST00000233242 KIAA1024LP59773 190 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 TAF9Q16594 264 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 PPP1R35Q8TAP8 253 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 DYNC2LI1Q8TCX1 351 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 ASB11Q8WXH4 323 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 LRFN5Q96NI6 719 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 CHRNA9Q9UGM1 479 aa7.69□□□□□ -1.18
APOB-201ENST00000233242 TRIM77I1YAP6 450 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 TRAPPC6AO75865 159 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 GATMP50440 423 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 EBPQ15125 230 aaKnown RBP7.68□□□□□ -1.18
APOB-201ENST00000233242 BRICD5Q6PL45 260 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 OPN5Q6U736 354 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 GRAMD2AQ8IUY3 354 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 MSI2Q96DH6 328 aaKnown RBP7.68□□□□□ -1.18
APOB-201ENST00000233242 ZCCHC4Q9H5U6 513 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ACKR4Q9NPB9 350 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 SNRPBP14678 240 aaKnown RBP7.68□□□□□ -1.18
APOB-201ENST00000233242 FPR3P25089 353 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 MC3RP41968 323 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 LMAN2Q12907 356 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ZNF789Q5FWF6 425 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 SMIM3Q9BZL3 60 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 SPNS1Q9H2V7 528 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 LIN7BQ9HAP6 207 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 REV1Q9UBZ9 1251 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 CSF2RAP15509 400 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 PIGAP37287 484 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 RIN1Q13671 783 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 COMMD1Q8N668 190 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ZBTB44Q8NCP5 570 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ISG20Q96AZ6 181 aaKnown RBP7.68□□□□□ -1.18
APOB-201ENST00000233242 PCDHGA6Q9Y5G7 932 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 A0A1B0GUH1 482 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ZNF840PA6NDX5 716 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 GASTP01350 101 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 NAGAP17050 411 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 MZT1Q08AG7 82 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ACOT7LQ6ZUV0 252 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 FAM160A2Q8N612 972 aaPredicted RBP7.68□□□□□ -1.18
APOB-201ENST00000233242 HORMAD2Q8N7B1 307 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 FAM213BQ8TBF2 198 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 DDOQ99489 341 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 HLA-FP30511 346 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ACY1Q03154 408 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 STEAP1BQ6NZ63 245 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 OR51L1Q8NGJ5 315 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 NEURL3Q96EH8 262 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 A4GALTQ9NPC4 353 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 PCDHB10Q9UN67 800 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ARRDC5A6NEK1 342 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 ITGB2P05107 769 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 EMP2P54851 167 aa7.68□□□□□ -1.18
APOB-201ENST00000233242 TRAPPC6BQ86SZ2 158 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms