RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 LIPKQ5VXJ0 399 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 TMPRSS11AQ6ZMR5 421 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 LHFPL3Q86UP9 236 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 FAM98AQ8NCA5 519 aaKnown RBP15.88■□□□□ 0.13
VRK1-201ENST00000216639 OR5M3Q8NGP4 307 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 OR52N1Q8NH53 320 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 LIPHQ8WWY8 451 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 GATAD2BQ8WXI9 593 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 ATOH1Q92858 354 aaPredicted RBP15.88■□□□□ 0.13
VRK1-201ENST00000216639 PTP4A1Q93096 173 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 TMCO6Q96DC7 493 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 DEPDC7Q96QD5 511 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 ARHGAP9Q9BRR9 750 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 SMOC1Q9H4F8 434 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 MED20Q9H944 212 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 PALMDQ9NP74 551 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 NANSQ9NR45 359 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 INPP5EQ9NRR6 644 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 ERVK13-1Q9NX77 482 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 CHRNA9Q9UGM1 479 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 SCO2O43819 266 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 AKAP8O43823 692 aaKnown RBP15.88■□□□□ 0.13
VRK1-201ENST00000216639 IDH3BO43837 385 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 GPX5O75715 221 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 NAGAP17050 411 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 OPRL1P41146 370 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 RPS3AP61247 264 aaKnown RBP15.88■□□□□ 0.13
VRK1-201ENST00000216639 POU4F2Q12837 409 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 DOC2BQ14184 412 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 ZNF74Q16587 644 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 FCRLBQ6BAA4 426 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 ACBD7Q8N6N7 88 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 LRRC17Q8N6Y2 441 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 OR52E2Q8NGJ4 325 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 OR6Q1Q8NGQ2 317 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 RHBDD1Q8TEB9 315 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 TEAD3Q99594 435 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 RTN4RQ9BZR6 473 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 OR51V1Q9H2C8 321 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 IER3IP1Q9Y5U9 82 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 SEC16AO15027 2179 aa15.88■□□□□ 0.13
VRK1-201ENST00000216639 C9J4A7 227 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 MCIDASD6RGH6 385 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 ARPC3O15145 178 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 ZFAND5O76080 213 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 RPS4XP62701 263 aaKnown RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 TPBGQ13641 420 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 ZNF362Q5T0B9 420 aaPredicted RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 LCN10Q6JVE6 187 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 C16orf87Q6PH81 154 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 DBX2Q6ZNG2 339 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 LSRQ86X29 649 aaPredicted RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 SLC15A4Q8N697 577 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 SIRT6Q8N6T7 355 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 B4GALNT2Q8NHY0 566 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 DACH2Q96NX9 599 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 GPX7Q96SL4 187 aaPredicted RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 WDR77Q9BQA1 342 aaPredicted RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 HCAR1Q9BXC0 346 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 HIF3AQ9Y2N7 669 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 SLC6A5Q9Y345 797 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 CAB39Q9Y376 341 aaPredicted RBP15.87■□□□□ 0.13
VRK1-201ENST00000216639 PCDHGB6Q9Y5F9 930 aa15.87■□□□□ 0.13
VRK1-201ENST00000216639 LRRN3E7EW58 273 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 J3QRE1 110 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 SLC25A12O75746 678 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 HIST1H2ABP04908 130 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 MST1P26927 711 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 TMED10P49755 219 aaKnown RBP15.86■□□□□ 0.13
VRK1-201ENST00000216639 LGALS3BPQ08380 585 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 ACSM1Q08AH1 577 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 SOWAHCQ53LP3 525 aaPredicted RBP15.86■□□□□ 0.13
VRK1-201ENST00000216639 TCEAL6Q6IPX3 200 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 HIST3H2AQ7L7L0 130 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 HIST1H2ACQ93077 130 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 MR1Q95460 341 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 TCEAL3Q969E4 200 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 SIAEQ9HAT2 523 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 MMP25Q9NPA2 562 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 NRIP3Q9NQ35 241 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 HAO2Q9NYQ3 351 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 PMF1-BGLAPU3KQ54 211 aa15.86■□□□□ 0.13
VRK1-201ENST00000216639 DAPL1A0PJW8 107 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 METTL15A6NJ78 407 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 C12orf71A8MTZ7 269 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 SLC30A4O14863 429 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 GMFGO60234 142 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 HIST1H1CP16403 213 aaKnown RBP15.85■□□□□ 0.13
VRK1-201ENST00000216639 SLC2A5P22732 501 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 CRYBB2P43320 205 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 POLR2HP52434 150 aaKnown RBP15.85■□□□□ 0.13
VRK1-201ENST00000216639 ACTC1P68032 377 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 ACTA1P68133 377 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 LCN1P1Q5VSP4 162 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 IGFN1Q86VF2 1251 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 CYB561A3Q8NBI2 242 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 OR4K13Q8NH42 304 aa15.85■□□□□ 0.13
VRK1-201ENST00000216639 THAP3Q8WTV1 239 aaPredicted RBP15.85■□□□□ 0.13
VRK1-201ENST00000216639 KISS1RQ969F8 398 aaPredicted RBP15.85■□□□□ 0.13
VRK1-201ENST00000216639 CMKLR1Q99788 373 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms