RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 RNF223E7ERA6 249 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 SDHDO14521 159 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 ABCD4O14678 606 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 MRPL33O75394 65 aaKnown RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 C1QCP02747 245 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 PGRP06401 933 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 IL12AP29459 219 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 RYKP34925 604 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CHI3L1P36222 383 aaPredicted RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 ACVR1BP36896 505 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CDKN1AP38936 164 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 SLC1A3P43003 542 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 IDH2P48735 452 aaKnown RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 ANXA11P50995 505 aaKnown RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 UFM1P61960 85 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 SLC35A1P78382 337 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 BST1Q10588 318 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 VEZF1Q14119 521 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 STK11Q15831 433 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 GABRA6Q16445 453 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 SYPL1Q16563 259 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 GSTA3Q16772 222 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 GPAT3Q53EU6 434 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 AGAP6Q5VW22 663 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 C11orf71Q6IPW1 123 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 SPATA19Q7Z5L4 167 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 RNF130Q86XS8 419 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CCDC103Q8IW40 242 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 CNOT9Q92600 299 aaKnown RBP13.97□□□□□ -0.17
ERCC1-201ENST00000013807 MDFIQ99750 246 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 OR11A1Q9GZK7 315 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 PNPOQ9NVS9 261 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 PARPBPQ9NWS1 579 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 OSGIN1Q9UJX0 560 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 RAB21Q9UL25 225 aa13.97□□□□□ -0.17
ERCC1-201ENST00000013807 TMED7-TICAM2A0A0A6YYA0 188 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 DBIP07108 87 aaKnown RBP13.96□□□□□ -0.17
ERCC1-201ENST00000013807 CHRM4P08173 479 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 BGNP21810 368 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 TTKP33981 857 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 HPCAP84074 193 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 SLC17A1Q14916 467 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.96□□□□□ -0.17
ERCC1-201ENST00000013807 CROCCP2Q86T23 111 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 ANKFN1Q8N957 763 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 GLB1L3Q8NCI6 653 aaPredicted RBP13.96□□□□□ -0.17
ERCC1-201ENST00000013807 C1orf162Q8NEQ5 155 aaPredicted RBP13.96□□□□□ -0.17
ERCC1-201ENST00000013807 DDIT4LQ96D03 193 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 PANX1Q96RD7 426 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 DHRS9Q9BPW9 319 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 PARD6BQ9BYG5 372 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 ALG2Q9H553 416 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 B3GALT5Q9Y2C3 310 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 FLVCR1Q9Y5Y0 555 aa13.96□□□□□ -0.17
ERCC1-201ENST00000013807 FBN3Q75N90 2809 aa13.96□□□□□ -0.18
ERCC1-201ENST00000013807 ANK3Q12955 4377 aaKnown RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 E7EQL1 145 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 AP3D1O14617 1153 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 HDAC3O15379 428 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 TLX2O43763 284 aaPredicted RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 NDUFS7O75251 213 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 SNNO75324 88 aaPredicted RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 RAD51DO75771 328 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 ITGA5P08648 1049 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 IMPDH2P12268 514 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 IL7RP16871 459 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 CD40P25942 277 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 CDKN2CP42773 168 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 MVDP53602 400 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 SLC18A1P54219 525 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 CDH11P55287 796 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 DMTNQ08495 405 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 EPS8Q12929 822 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 GNA13Q14344 377 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 MAPK11Q15759 364 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 KLHL17Q6TDP4 642 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 ZNF440Q8IYI8 595 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 UBE2J2Q8N2K1 259 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 C17orf78Q8N4C9 275 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 OR10H5Q8NGA6 315 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 TMEM45BQ96B21 275 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 MAELQ96JY0 434 aaKnown RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 OR52E6Q96RD3 313 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 NAA11Q9BSU3 229 aaPredicted RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 SF3B5Q9BWJ5 86 aaKnown RBP13.95□□□□□ -0.18
ERCC1-201ENST00000013807 CBLN4Q9NTU7 201 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 SLC9A8Q9Y2E8 581 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 MALRD1Q5VYJ5 2156 aa13.95□□□□□ -0.18
ERCC1-201ENST00000013807 A0A096LNT2 108 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 CIB4A0PJX0 185 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 CDHR4A6H8M9 788 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 CFAP73A6NFT4 308 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 CD5LO43866 347 aa13.94□□□□□ -0.18
ERCC1-201ENST00000013807 IGHV3-9P01782 118 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms