RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TBC1D3EA0A087X179 549 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 M0R233 179 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SELENOFO60613 162 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 STX11O75558 287 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 PROS1P07225 676 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CT62P0C5K7 136 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 NID1P14543 1247 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 ZNF3P17036 446 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 TNFRSF17Q02223 184 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SFRP5Q5T4F7 317 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 TMPRSS11FQ6ZWK6 438 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 BPHLQ86WA6 291 aaPredicted RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 CCL4L1Q8NHW4 92 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 ZPLD1Q8TCW7 415 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SEMA4CQ9C0C4 833 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 ZNF350Q9GZX5 532 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 PCDHGA9Q9Y5G4 932 aaKnown RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 IER3IP1Q9Y5U9 82 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SLC31A1O15431 190 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CTSVO60911 334 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 PEX14O75381 377 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CCL5P13501 91 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CPMP14384 443 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 EMDP50402 254 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SIRPAP78324 504 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 OC90Q02509 493 aaPredicted RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 CDK5R1Q15078 307 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 TRAM1Q15629 374 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 EIPR1Q53HC9 387 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 SMIM4Q8WVI0 70 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 INPP5EQ9NRR6 644 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 PHPT1Q9NRX4 125 aaPredicted RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 LYARQ9NX58 379 aaKnown RBP12.92□□□□□ -0.34
USH1C-201ENST00000005226 TBC1D29Q9UFV1 150 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 DPP7Q9UHL4 492 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 PRELID1Q9Y255 219 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CA5BQ9Y2D0 317 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 CACNA1CQ13936 2221 aa12.92□□□□□ -0.34
USH1C-201ENST00000005226 A0A1B0GVT2 93 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 A0A1B0GWA3 101 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 CARNS1A5YM72 827 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 TSPAN4O14817 238 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 FGF17O60258 216 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 DBIP07108 87 aaKnown RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 CXCL2P19875 107 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 TAS2R43P59537 309 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 FHL1Q13642 323 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 NDUFAF6Q330K2 333 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 HSD17B12Q53GQ0 312 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 VITQ6UXI7 678 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 NHLRC1Q6VVB1 395 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 PAQR7Q86WK9 346 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 RNF113BQ8IZP6 322 aaKnown RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 ABRACLQ9P1F3 81 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 MGAT4CQ9UBM8 478 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 NUP50Q9UKX7 468 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 TEX51A0A1B0GUA7 166 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 A0A1B0GVI7 797 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 A0A1W2PPL8 197 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 OR5K3A6NET4 321 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 POLR2CP19387 275 aaPredicted RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 GBX2P52951 348 aaPredicted RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 RAB14P61106 215 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 OPCMLQ14982 345 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 CST6Q15828 149 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 C2orf27AQ580R0 203 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 FAM199XQ6PEV8 388 aaPredicted RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 LSMEM1Q8N8F7 131 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 OR4N2Q8NGD1 307 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 OR52B4Q8NGK2 314 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 SLC25A38Q96DW6 304 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 SMIM19Q96E16 107 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 SFXN2Q96NB2 322 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 TOX2Q96NM4 488 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 C2orf42Q9NWW7 574 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 COPZ2Q9P299 210 aa12.91□□□□□ -0.34
USH1C-201ENST00000005226 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
USH1C-201ENST00000005226 TRAV1-2A0A0B4J238 106 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 MCIDASD6RGH6 385 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 OGG1O15527 345 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 KHDRBS3O75525 346 aaKnown RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 SIX6O95475 246 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 THBS1P07996 1170 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 RRASP10301 218 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 UGT2B7P16662 529 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 CD53P19397 219 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 SRMP19623 302 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 PSMB1P20618 241 aaKnown RBP12.9□□□□□ -0.34
USH1C-201ENST00000005226 DCTDP32321 178 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
USH1C-201ENST00000005226 OR6K6Q8NGW6 343 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms