RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Mep1aP28825 747 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Inpp5jP59644 1003 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fam220aQ3ZN08 260 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 C1orf109Q499E6 217 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tmprss11eQ5S248 423 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 PiglQ5SX19 252 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Nptx1Q62443 432 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ces3aQ63880 571 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Hand1Q64279 216 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Lcn12Q6JVL5 193 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr138Q7TRI7 312 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Znf628Q8CJ78 1038 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdr74Q8VCG3 384 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Nle1Q8VEJ4 485 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdr45Q91VM3 360 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 SharpinQ91WA6 380 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pskh1Q91YA2 424 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdsub1Q9D0I6 474 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rnf186Q9D241 226 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 5430402E10RikQ9D3N5 173 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm42420A0A0J9YUQ2 99 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Hoxa1P09022 331 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gdf7P43029 461 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Agbl4Q09LZ8 540 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 FcamrQ2TB54 535 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Plk5Q4FZD7 595 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Slc16a9Q7TM99 508 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cpeb2Q812E0 521 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Kdelr3Q8R1L4 214 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr480Q8VEZ0 312 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr126Q8VGF0 319 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr558Q8VGZ7 317 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Fmo4Q8VHG0 560 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ubox5Q925F4 539 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Lysmd3Q99LE3 305 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Acbd6Q9D061 282 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Acp1Q9D358 158 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ankrd22Q9D3J5 191 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Hrct1Q9D6B9 109 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 TsaccQ9DA44 124 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Kcnip1Q9JJ57 227 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tmeff2Q9QYM9 374 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Usp21Q9QZL6 566 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ap4s1Q9WVL1 144 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cxcl15Q9WVL7 167 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mrgpra2aA0A0R4J1Z0 331 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zscan4-ps1A0A1C7CYV3 506 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1436A0PK57 315 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Esp18A8R0V1 91 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm13285B1AYI3 182 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm13275B1AYI8 182 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Hbb-bh2B2RVB7 147 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tatdn2B7ZNL9 783 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Samd13D3YUG0 102 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cntnap3E9PY62 1287 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Adh6aE9Q5Z6 375 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Gm5134E9QAB5 671 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Esp8F7AMQ8 149 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 P06335 190 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 CtslP06797 334 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pgk1P09411 417 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ier3P46694 153 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Tmem199Q5SYH2 208 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Zfp663Q6NXM6 656 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ip6k1Q6PD10 433 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rdh9Q8K5C8 317 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wnt9aQ8R5M2 365 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Sgms1Q8VCQ6 419 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Scpep1Q920A5 452 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Q99KU6 348 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Magt1Q9CQY5 335 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Yif1bQ9CX30 311 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cers5Q9D6K9 414 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Znf207Q9JMD0 495 aaKnown RBP8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Lhx6Q9R1R0 363 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 AknaQ80VW7 1404 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Olfr1104A2AVB5 310 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn2r73D3Z7M3 851 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Wdfy1E9Q4P1 410 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Vmn1r121K7N6J4 314 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ascl5M0QWB7 188 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 DcnP28654 354 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Htr5bP31387 370 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cd69P37217 199 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rln1P47932 185 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Drd2P61168 444 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pde7aP70453 456 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Mgat3Q10470 538 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Pafah1b2Q61206 229 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Ecm1Q61508 559 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 MaoaQ64133 526 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Slc6a7Q6PGE7 637 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rell2Q8BRJ3 303 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Slc18a2Q8BRU6 517 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rab43Q8CG50 210 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Cpne5Q8JZW4 593 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Poc1aQ8JZX3 405 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Agpat2Q8K3K7 278 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 Rfx5Q9JL61 658 aa8.38□□□□□ -1.07
Clcn3-202ENSMUST00000056508 GltpQ9JL62 209 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms