RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Smarcd3Q6P9Z1 483 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr1140Q7TR39 311 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Rgp1Q8BHT7 391 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Pou6f2Q8BJI4 691 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gm10283Q8C3L5 117 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tspan31Q9CQ88 210 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Ssr3Q9DCF9 185 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr971Q9EQ96 307 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Chst11Q9JME2 352 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Efemp2Q9WVJ9 443 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Mocs2Q9Z223 189 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Vmn1r10W4VSP8 311 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Pcsk5Q04592 1877 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tox2A2A472 547 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr1095A3KPP7 308 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gm3696K7N751 203 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Vmn2r95L7N274 845 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cnih2O35089 160 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gpr27O54897 379 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gstm2P15626 218 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Il13P20109 131 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Apoc2Q05020 97 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Mmp7Q10738 264 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 FcamrQ2TB54 535 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr12Q60894 333 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 JamlQ80UL9 379 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slc35f1Q8BGK5 408 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Lkaaear1Q8BIG2 198 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Q8BPC6 396 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Q8C3I9 435 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Anapc10Q8K2H6 185 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Mboat2Q8R3I2 519 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr656Q8VGX9 329 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slc25a36Q922G0 311 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 BniplQ99JU7 328 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gm10762Q9CZN6 115 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slamf9Q9D780 285 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Prkar1aQ9DBC7 381 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cnot9Q9JKY0 299 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slc39a1Q9QZ03 324 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Adamts20P59511 1906 aa11.75□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Igkv12-44A0A140T8M2 115 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 CtcflA2APF3 636 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 LexmA2AVQ5 414 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gsg1lD3Z7H4 322 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr653E9PVA0 317 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Zfp54E9PW05 585 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 4930579F01RikE9Q3L6 325 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Vmn2r69G3XA45 850 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Sult3a2G5E904 293 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Prdx6O08709 224 aaKnown RBP11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Prl7a1O54830 266 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Nfatc1O88942 717 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 HexaP29416 528 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Dnaaf3Q3UYV8 586 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Sema3bQ62177 748 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr1134Q7TR43 312 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cd177Q8R2S8 817 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 SgtbQ8VD33 304 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Olfr799Q8VGI7 311 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 AldobQ91Y97 364 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gorasp2Q99JX3 451 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 HnrnpdlQ9Z130 301 aaKnown RBP11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Igkv9-123A0A140T8N8 117 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cox5bP19536 128 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Atp6v1e1P50518 226 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tead3P70210 439 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Adra2aQ01338 450 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 D17Wsu92eQ3TT38 291 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Sidt1Q6AXF6 827 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tmem164Q6PHN7 296 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Zfp184Q7TSH9 737 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Aldh3b1Q80VQ0 468 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Elmod2Q8BGF6 293 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slc36a2Q8BHK3 478 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 SheQ8BSD5 492 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gpr157Q8C206 330 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Erlec1Q8VEH8 483 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cdhr1Q8VHP6 859 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Med31Q9CXU1 131 aaKnown RBP11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Fank1Q9DAM9 344 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Nkx2-4Q9EQM3 354 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Nek6Q9ES70 313 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 RlimQ9WTV7 600 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Dock6Q8VDR9 2080 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 9930021J03RikH3BKP8 2027 aa11.74□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tcrg-V7A0A0A6YYE8 116 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Tbc1d25A1A5B6 742 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gm14418A2ARR6 358 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Gm14322A2AW66 358 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Ces2gE9PV38 560 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Cfl1P18760 166 aaKnown RBP11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Sdc3Q64519 442 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Klhl6Q6V595 619 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Nceh1Q8BLF1 408 aaKnown RBP11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Slc35c1Q8BLX4 363 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Mettl6Q8BVH9 282 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Ssuh2Q8C3L1 340 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 AcppQ8CE08 381 aa11.73□□□□□ -0.53
Rnf4-201ENSMUST00000030992 Csnka2ipQ8CH19 720 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms