RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	BLOC1S5-TXNDC5	H3BN57	136 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TLX2	O43763	284 aa	Predicted RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ICOSLG	O75144	302 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SPDEF	O95238	335 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	B3GALT4	O96024	378 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	IFNW1	P05000	195 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	GKN3P	P0CG01	181 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	DRD5	P21918	477 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ABCD3	P28288	659 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	GDF5	P43026	501 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RAD52	P43351	418 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RAB5C	P51148	216 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FOXK2	Q01167	660 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	IRF8	Q02556	426 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FABP9	Q0Z7S8	132 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TOMM20	Q15388	145 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	H3F3C	Q6NXT2	135 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	DMRTC2	Q8IXT2	367 aa	Predicted RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	LINC00471	Q8N535	108 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SORCS1	Q8WY21	1168 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SCAMP4	Q969E2	229 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TEX101	Q9BY14	249 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FAM117A	Q9C073	453 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TRPV4	Q9HBA0	871 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	BEX1	Q9HBH7	125 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	NKIRAS2	Q9NYR9	191 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TVP23B	Q9NYZ1	205 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF69	Q9UC07	566 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ZNF282	Q9UDV7	671 aa	Predicted RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RASD1	Q9Y272	281 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	NPFFR2	Q9Y5X5	522 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	POM121B	A6NF01	834 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CD8B2	A6NJW9	211 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RFPL4A	A6NLU0	287 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RFPL4AL1	F8VTS6	287 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306		H3BN98	237 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306		J3KTA2	159 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ARPC1B	O15143	372 aa	Known RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	KHDRBS3	O75525	346 aa	Known RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CTSL	P07711	333 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CD8B	P10966	210 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC2A1	P11166	492 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	GNS	P15586	552 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ADCYAP1	P18509	176 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ANXA7	P20073	488 aa	Known RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TNFRSF1B	P20333	461 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	IDS	P22304	550 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TACR1	P25103	407 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ITGA3	P26006	1051 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CERS1	P27544	350 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	OR1E2	P47887	323 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	MVD	P53602	400 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	PPIA	P62937	165 aa	Known RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SCARB2	Q14108	478 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CPSF6	Q16630	551 aa	Known RBP eCLIP	9.98	□□□□□ -0.81	3e-6	■■■□□ 16.2
CHD2-223	ENST00000636306	NKAPL	Q5M9Q1	402 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	EOGT	Q5NDL2	527 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	DCST1	Q5T197	706 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FAM46C	Q5VWP2	391 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FRG2	Q64ET8	278 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	TCEAL6	Q6IPX3	200 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ADNP2	Q6IQ32	1131 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SFXN4	Q6P4A7	337 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	RFLNA	Q6ZTI6	216 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	NPAS3	Q8IXF0	933 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	NAGS	Q8N159	534 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ARRDC1	Q8N5I2	433 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	STK35	Q8TDR2	534 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	SUSD6	Q92537	303 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	LRR1	Q96L50	414 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	ASB16	Q96NS5	453 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	FRG2B	Q96QU4	278 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	MTERF1	Q99551	399 aa	Known RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	GGACT	Q9BVM4	153 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	PBX4	Q9BYU1	374 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	OR10A4	Q9H209	315 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	NOX3	Q9HBY0	568 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	CHMP1A	Q9HD42	196 aa	Predicted RBP	9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	PTGFRN	Q9P2B2	879 aa		9.98	□□□□□ -0.81
CHD2-223	ENST00000636306	KCNE1B	A0A087WTH5	132 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	C2orf92	A0A1B0GVN3	265 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	TRBC2	A0A5B9	178 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	SLC5A10	A0PJK1	596 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	FAM86C2P	A6NEL3	165 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	OR2AG2	A6NM03	316 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	KDM4E	B2RXH2	506 aa	Predicted RBP	9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	AP4M1	O00189	453 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	PGRMC2	O15173	223 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	TSPAN6	O43657	245 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	PCDH7	O60245	1069 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	PDYN	P01213	254 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	C1QC	P02747	245 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	COX7A2	P14406	83 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	CBR1	P16152	277 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	NDUFB7	P17568	137 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	AMD1	P17707	334 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	AQP1	P29972	269 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	SDHA	P31040	664 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	CSF2RB	P32927	897 aa		9.97	□□□□□ -0.81
CHD2-223	ENST00000636306	GDNF	P39905	211 aa		9.97	□□□□□ -0.81

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