RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CTPS2Q9NRF8 586 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 SELENONQ9NZV5 590 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 ACTR3BQ9P1U1 418 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 TMED7-TICAM2A0A0A6YYA0 188 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 GJE1A6NN92 205 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 GSC2O15499 205 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 FMO6PO60774 539 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 ZNF708P17019 499 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 HTR2AP28223 471 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 GRNP28799 593 aaKnown RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 TACR3P29371 465 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 SFTPDP35247 375 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 OR1E2P47887 323 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 DLX5P56178 289 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 RAC1P63000 192 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 TRIM25Q14258 630 aaKnown RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 BCL2A1Q16548 175 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 MTX3Q5HYI7 312 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 ZNF585AQ6P3V2 769 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 CYP2R1Q6VVX0 501 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 DEF8Q6ZN54 512 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 DHFR2Q86XF0 187 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 ULK2Q8IYT8 1036 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 OR4D11Q8NGI4 311 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 SLC25A43Q8WUT9 341 aaPredicted RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 ASB9Q96DX5 294 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 WDYHV1Q96HA8 205 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 WFDC6Q9BQY6 131 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 CADM1Q9BY67 442 aaKnown RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 TRIM15Q9C019 465 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 PRDM14Q9GZV8 571 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 TP63Q9H3D4 680 aaPredicted RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 DCAF13Q9NV06 445 aaKnown RBP13.25□□□□□ -0.29
PNKP-221ENST00000627317 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 CHRNA9Q9UGM1 479 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 TMED7Q9Y3B3 224 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 V9GYQ6 96 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
PNKP-221ENST00000627317 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 A0A1B0GWA3 101 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CPSF4LA6NMK7 179 aaKnown RBP13.24□□□□□ -0.29
PNKP-221ENST00000627317 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 EIF1AYO14602 144 aaKnown RBP13.24□□□□□ -0.29
PNKP-221ENST00000627317 WDR1O75083 606 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 OPN1LWP04000 364 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 IFNW1P05000 195 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 GABRA1P14867 456 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CPN1P15169 458 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CCNA2P20248 432 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 IL11P20809 199 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CXCR1P25024 350 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 SLC7A1P30825 629 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CLDN18P56856 261 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CLDN20P56880 219 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.296e-8■■■■■ 27.3
PNKP-221ENST00000627317 OR1Q1Q15612 314 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 NPTX1Q15818 432 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 LCN8Q6JVE9 175 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 XKRXQ6PP77 449 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 CHMP1BQ7LBR1 199 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 RBM45Q8IUH3 476 aaKnown RBP13.24□□□□□ -0.29
PNKP-221ENST00000627317 LILRA2Q8N149 483 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 LSMEM1Q8N8F7 131 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 DNAJA4Q8WW22 397 aaPredicted RBP13.24□□□□□ -0.29
PNKP-221ENST00000627317 C3orf49Q96BT1 292 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 LRGUKQ96M69 825 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 KLHL15Q96M94 604 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 ADAM19Q9H013 955 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 OSGIN1Q9UJX0 560 aa13.24□□□□□ -0.29
PNKP-221ENST00000627317 ELOA3DA6NLF2 546 aaPredicted RBP13.23□□□□□ -0.29
PNKP-221ENST00000627317 PRKD3O94806 890 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 TFPIP10646 304 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ACVR2AP27037 513 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 SHC1P29353 583 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 PTGER4P35408 488 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 TAS2R41P59536 307 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 RPS3AP61247 264 aaKnown RBP13.23□□□□□ -0.29
PNKP-221ENST00000627317 TRAP1Q12931 704 aaKnown RBP13.23□□□□□ -0.29
PNKP-221ENST00000627317 ELOA3BQ3SY89 546 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 TMEM176BQ3YBM2 270 aaPredicted RBP13.23□□□□□ -0.29
PNKP-221ENST00000627317 SYT14P1Q58G82 188 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ALG10BQ5I7T1 473 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ENTPD8Q5MY95 495 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 PDSS1Q5T2R2 415 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ZNF613Q6PF04 617 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ESPNLQ6ZVH7 1005 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 GGNQ86UU5 652 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ACBD4Q8NC06 268 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 ELOA3Q8NG57 546 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 OR2V1Q8NHB1 315 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
PNKP-221ENST00000627317 MMADHCQ9H3L0 296 aaPredicted RBP13.23□□□□□ -0.29
PNKP-221ENST00000627317 FAM215AQ9Y5M1 114 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms