RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CSNK1DP48730 415 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SH3BGRP55822 239 aaPredicted RBP2□□□□□ -2.09
VBP1-204ENST00000625964 KCTD19Q17RG1 926 aaPredicted RBP2□□□□□ -2.09
VBP1-204ENST00000625964 ZNF691Q5VV52 312 aa2□□□□□ -2.09
VBP1-204ENST00000625964 FICDQ9BVA6 458 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SPATA16Q9BXB7 569 aa2□□□□□ -2.09
VBP1-204ENST00000625964 NAT10Q9H0A0 1025 aaKnown RBP2□□□□□ -2.09
VBP1-204ENST00000625964 RSPH9Q9H1X1 276 aaPredicted RBP2□□□□□ -2.09
VBP1-204ENST00000625964 PSG11Q9UQ72 335 aa2□□□□□ -2.09
VBP1-204ENST00000625964 ASF1AQ9Y294 204 aa2□□□□□ -2.09
VBP1-204ENST00000625964 ALG6Q9Y672 507 aa2□□□□□ -2.09
VBP1-204ENST00000625964 NPATQ14207 1427 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SCAPERQ9BY12 1400 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SETBP1Q9Y6X0 1596 aa2□□□□□ -2.09
VBP1-204ENST00000625964 SETD1AO15047 1707 aaKnown RBP2□□□□□ -2.09
VBP1-204ENST00000625964 CDK12Q9NYV4 1490 aaPredicted RBP1.99□□□□□ -2.09
VBP1-204ENST00000625964 ABCA9Q8IUA7 1624 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 ZMYM4Q5VZL5 1548 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 UGGT2Q9NYU1 1516 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PPIAL4CA0A0B4J2A2 164 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 TMX2-CTNND1H3BSU7 103 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 GFYI3L273 518 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 LANCL1O43813 399 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PRKYO43930 277 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 B3GAT3O94766 335 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PCCAP05165 728 aaPredicted RBP1.99□□□□□ -2.09
VBP1-204ENST00000625964 PPIAL4GP0DN37 164 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 GAP43P17677 238 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 IL10P22301 178 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PSMA2P25787 234 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 CAMLGP49069 296 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PRKXP51817 358 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PFN3P60673 137 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 EWSR1Q01844 656 aaKnown RBP eCLIP1.99□□□□□ -2.09
VBP1-204ENST00000625964 PAX5Q02548 391 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 ARL6IP1Q15041 203 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PTGES3Q15185 160 aaKnown RBP1.99□□□□□ -2.09
VBP1-204ENST00000625964 PARP10Q53GL7 1025 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 TOR1AIP1Q5JTV8 583 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 ATL3Q6DD88 541 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PLBD1Q6P4A8 553 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 LRRC8BQ6P9F7 803 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 CCDC137Q6PK04 289 aaKnown RBP1.99□□□□□ -2.09
VBP1-204ENST00000625964 ISLR2Q6UXK2 745 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 PNKDQ8N490 385 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 ZNF540Q8NDQ6 660 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 OR51G1Q8NGK1 321 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 RAPGEF5Q92565 580 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 MYLPFQ96A32 169 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 MRPL38Q96DV4 380 aaKnown RBP1.99□□□□□ -2.09
VBP1-204ENST00000625964 SIGLEC1Q9BZZ2 1709 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 KRT23Q9C075 422 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 HSD3B7Q9H2F3 369 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 CNTLNQ9NXG0 1405 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 CHMP2BQ9UQN3 213 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 NEUROG3Q9Y4Z2 214 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 MAD1L1Q9Y6D9 718 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 CLCA3PQ9Y6N3 262 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 ASTN1O14525 1302 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 LRRC7Q96NW7 1537 aa1.99□□□□□ -2.09
VBP1-204ENST00000625964 JCADQ9P266 1359 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 ABCA8O94911 1581 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 IQGAP2Q13576 1575 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 NACAE9PAV3 2078 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 KIF27Q86VH2 1401 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 IGKV2-28A0A075B6P5 120 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 IGHV3OR16-13A0A075B7E8 117 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 IGHV2-70DA0A0C4DH43 119 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 NKX2-6A6NCS4 301 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 VSTM2BA6NLU5 285 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 E7ESA3 106 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 CLDN5O00501 218 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 OR10H3O60404 316 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 SCGB2A1O75556 95 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 MBD3O95983 291 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 CA1P00915 261 aaPredicted RBP1.98□□□□□ -2.09
VBP1-204ENST00000625964 IGKV2D-28P01615 120 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 P04436 131 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 GIPP09681 153 aaPredicted RBP1.98□□□□□ -2.09
VBP1-204ENST00000625964 RBMY1CP0DJD4 496 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 ZNF44P15621 663 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 TNNI3P19429 210 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 CYP2B6P20813 491 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 ATP6V1B2P21281 511 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 LEPP41159 167 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 LHX2P50458 406 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 BIDP55957 195 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 HERVK_113P61574 105 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 SELENOTP62341 195 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 NUCB2P80303 420 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 C12orf60Q5U649 245 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 ACP7Q6ZNF0 438 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 ACOT7LQ6ZUV0 252 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 KIAA1328Q86T90 577 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 TPRA1Q86W33 373 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 OR5L2Q8NGL0 311 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 OR56B4Q8NH76 319 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 TCTEX1D2Q8WW35 142 aa1.98□□□□□ -2.09
VBP1-204ENST00000625964 CHCHD10Q8WYQ3 142 aaPredicted RBP1.98□□□□□ -2.09
VBP1-204ENST00000625964 RPL3LQ92901 407 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms