RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CRMP1Q14194 572 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 KLHL12Q53G59 568 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 MEPCEQ7L2J0 689 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 OVCH1Q7RTY7 1134 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 CYB561A3Q8NBI2 242 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 SLC37A3Q8NCC5 494 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR51G2Q8NGK0 314 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR5M3Q8NGP4 307 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 ATOH1Q92858 354 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 HSPBAP1Q96EW2 488 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 LAT2Q9GZY6 243 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 HCRTR2O43614 444 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 LCN1P31025 176 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 IDUAP35475 653 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 CRYBB2P43320 205 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 RNF4P78317 190 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 ITGADQ13349 1161 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 CROCCP3Q8IVE0 287 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 APCDD1LQ8NCL9 501 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR6Q1Q8NGQ2 317 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 MCFD2Q8NI22 146 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 TRMT61AQ96FX7 289 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 ERMAPQ96PL5 475 aaPredicted RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 SECISBP2Q96T21 854 aaKnown RBP15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 AKIP1Q9NQ31 210 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 TNFRSF10DQ9UBN6 386 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 BAIAP2Q9UQB8 552 aa15.85■□□□□ 0.13
PCDHGC3-205ENST00000617641 SAGE2PA6NJ88 616 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 MCIDASD6RGH6 385 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 PPM1BO75688 479 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR7A10O76100 309 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 IGHA1P01876 353 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 SYPP08247 313 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 CLUP10909 449 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 PEPDP12955 493 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 CPEP16870 476 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 EMP2P54851 167 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 NFAM1Q8NET5 270 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF563Q8TA94 476 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 THAP3Q8WTV1 239 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 KISS1RQ969F8 398 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF649Q9BS31 505 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 TBL1XR1Q9BZK7 514 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR51V1Q9H2C8 321 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 AKIRIN1Q9H9L7 192 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 SEC14L4Q9UDX3 406 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 FBXL4Q9UKA2 621 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 METTL15A6NJ78 407 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 NTN3O00634 580 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 KHNYNO15037 678 aaKnown RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 NDUFB5O43674 189 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 NDUFB2O95178 105 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 TSPAN19P0C672 248 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 PNMTP11086 282 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF3P17036 446 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 HK1P19367 917 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 DUSP3P51452 185 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 PNLIPRP2P54317 469 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF791Q3KP31 576 aaPredicted RBP15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 TCEAL6Q6IPX3 200 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 BTLAQ7Z6A9 289 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ZNF485Q8NCK3 441 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 OR9Q1Q8NGQ5 310 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 METTL21AQ8WXB1 218 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 TCEAL3Q969E4 200 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 DEPDC7Q96QD5 511 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 FBXO8Q9NRD0 319 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 ERVK13-1Q9NX77 482 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 STUB1Q9UNE7 303 aa15.84■□□□□ 0.13
PCDHGC3-205ENST00000617641 CCDC182A6NF36 153 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 VSTM2BA6NLU5 285 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ALG1L2C9J202 215 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 CLDN25C9JDP6 229 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 LRRTM2O43300 516 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 PAICSP22234 425 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 PSMA1P25786 263 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC16A1P53985 500 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPS7P62081 194 aaKnown RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF404Q494X3 552 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ARHGAP11AQ6P4F7 1023 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 PSD4Q8NDX1 1056 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 C17orf47Q8NEP4 570 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC19A3Q9BZV2 496 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 CHRNA9Q9UGM1 479 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF337Q9Y3M9 751 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ADAM18Q9Y3Q7 739 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 IER3IP1Q9Y5U9 82 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 MPDZO75970 2070 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 A0A1W2PQD3 144 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 J3QRE1 110 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 SCO2O43819 266 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 GYPBP06028 91 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 BMP4P12644 408 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 ITPKBP27987 946 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 TACR3P29371 465 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 TOMM34Q15785 309 aaPredicted RBP15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 C16orf87Q6PH81 154 aa15.83■□□□□ 0.12
PCDHGC3-205ENST00000617641 PAPD4Q6PIY7 484 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms