RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 GPR141Q7Z602 305 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 TMEM163Q8TC26 289 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 TNFRSF13CQ96RJ3 184 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 SIGLEC11Q96RL6 698 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 ENKD1Q9H0I2 346 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 METTL7AQ9H8H3 244 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 OSGIN1Q9UJX0 560 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 TRAV27A0A087WT01 109 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 LOC101059948A0A1B0GTJ6 334 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 C2orf72A6NCS6 295 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 CXCR1P25024 350 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 MLF1P58340 268 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 GABREP78334 506 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 BICRALQ6AI39 1079 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 OR5M10Q6IEU7 315 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 BORAQ6PGQ7 559 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 RTL4Q6ZR62 310 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 SLC43A2Q8N370 569 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 LRR1Q96L50 414 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 TUBA1CQ9BQE3 449 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 MED17Q9NVC6 651 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 TAS2R10Q9NYW0 307 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 DNAJC27Q9NZQ0 273 aa19.65■□□□□ 0.74
USP6NL-204ENST00000606752 EFCAB10A6NFE3 127 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 ANKUB1A6NFN9 424 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 MASP2O00187 686 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 BHLHE40O14503 412 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 TM4SF5O14894 197 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 SURF4O15260 269 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CH25HO95992 272 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 MT-ND2P03891 347 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CEACAM1P13688 526 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 PCMT1P22061 227 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 MSX1P28360 303 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 PTGDSP41222 190 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CASP3P42574 277 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 SLC9A3P48764 834 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 SSR4P51571 173 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 EMX1Q04741 257 aaPredicted RBP19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CHAF1BQ13112 559 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 FHL1Q13642 323 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 FCRLBQ6BAA4 426 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 MARCH9Q86YJ5 346 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 DND1Q8IYX4 353 aaKnown RBP19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CYP4Z2PQ8N1L4 340 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 ASB15Q8WXK1 588 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 DGCR14Q96DF8 476 aaKnown RBP19.64■□□□□ 0.73
USP6NL-204ENST00000606752 GPR83Q9NYM4 423 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 CNOT2Q9NZN8 540 aaKnown RBP19.64■□□□□ 0.73
USP6NL-204ENST00000606752 PCDHGB6Q9Y5F9 930 aa19.64■□□□□ 0.73
USP6NL-204ENST00000606752 EXPH5Q8NEV8 1989 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 RIF1Q5UIP0 2472 aaKnown RBP19.63■□□□□ 0.73
USP6NL-204ENST00000606752 MAN1A2O60476 641 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 OR7A10O76100 309 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 TTKP33981 857 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 POLR2HP52434 150 aaKnown RBP19.63■□□□□ 0.73
USP6NL-204ENST00000606752 EGR4Q05215 589 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 Q0VFX4 171 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 SYT14P1Q58G82 188 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 IL20RBQ6UXL0 311 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 THSD4Q6ZMP0 1018 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 SLC46A3Q7Z3Q1 461 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 LNX2Q8N448 690 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 SVOPQ8N4V2 548 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 TMEM234Q8WY98 164 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 PLEKHA8Q96JA3 519 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 RBM38Q9H0Z9 239 aaKnown RBP19.63■□□□□ 0.73
USP6NL-204ENST00000606752 ZNF337Q9Y3M9 751 aa19.63■□□□□ 0.73
USP6NL-204ENST00000606752 RPL36Q9Y3U8 105 aaKnown RBP19.63■□□□□ 0.73
USP6NL-204ENST00000606752 CHCHD2Q9Y6H1 151 aaPredicted RBP19.63■□□□□ 0.73
USP6NL-204ENST00000606752 IGLV3-32A0A0A0MS00 114 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 CDK1P06493 297 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 CD82P27701 267 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 GRK5P34947 590 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 SLC15A1P46059 708 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 SNTA1Q13424 505 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 IL10RAQ13651 578 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 RAB39AQ14964 217 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 GRINAQ7Z429 371 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 BCDIN3DQ7Z5W3 292 aaKnown RBP19.62■□□□□ 0.73
USP6NL-204ENST00000606752 LIPHQ8WWY8 451 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 SECISBP2Q96T21 854 aaKnown RBP19.62■□□□□ 0.73
USP6NL-204ENST00000606752 MCCC2Q9HCC0 563 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 MED11Q9P086 117 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 PPP4R1LQ9P1A2 415 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 WIF1Q9Y5W5 379 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.62■□□□□ 0.73
USP6NL-204ENST00000606752 SERPINA7P05543 415 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 RBMS1P29558 406 aaKnown RBP19.62■□□□□ 0.73
USP6NL-204ENST00000606752 HTR3AP46098 478 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 ST3GAL4Q11206 333 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 H3F3CQ6NXT2 135 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 TMEM81Q6P7N7 255 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 RAB43Q86YS6 212 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 STX19Q8N4C7 294 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 TMEM156Q8N614 296 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 LRRC17Q8N6Y2 441 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 ST8SIA1Q92185 356 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 NKD1Q969G9 470 aa19.62■□□□□ 0.73
USP6NL-204ENST00000606752 ZNF582Q96NG8 517 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms