RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CTPS2Q9NRF8 586 aa16.99■□□□□ 0.31
CCDC9-205ENST00000600117 OSGIN2Q9Y236 505 aa16.99■□□□□ 0.31
CCDC9-205ENST00000600117 MAP1AP78559 2803 aaPredicted RBP16.98■□□□□ 0.31
CCDC9-205ENST00000600117 A0A1B0GWA3 101 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 OR14I1A6ND48 311 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 LINC01387J3KSC0 135 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 ELK4P28324 431 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 TACR3P29371 465 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 COPZ1P61923 177 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 GTF3C1Q12789 2109 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 OR1Q1Q15612 314 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 ZSCAN26Q16670 478 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 AAGABQ6PD74 315 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 ADGRG3Q86Y34 549 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 SARAFQ96BY9 339 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 PYURFQ96I23 114 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 TIMP4Q99727 224 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 OSGIN1Q9UJX0 560 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 ZNF835Q9Y2P0 537 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 V9GYQ6 96 aa16.98■□□□□ 0.31
CCDC9-205ENST00000600117 NPIPA2E9PIF3 369 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 NPIPA3F8WFD2 350 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 LYPD3O95274 346 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 ZNF708P17019 499 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 SHC1P29353 583 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 PTGS2P35354 604 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 GCKP35557 465 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 APOBEC1P41238 236 aaKnown RBP16.97■□□□□ 0.31
CCDC9-205ENST00000600117 HTR3AP46098 478 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 POLR2HP52434 150 aaKnown RBP16.97■□□□□ 0.31
CCDC9-205ENST00000600117 CLDN18P56856 261 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 RAC1P63000 192 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 ENTPD8Q5MY95 495 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 FKBP9P1Q75LS8 142 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 GDF7Q7Z4P5 450 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 ATG4DQ86TL0 474 aaPredicted RBP16.97■□□□□ 0.31
CCDC9-205ENST00000600117 WDYHV1Q96HA8 205 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 C7orf34Q96L11 122 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 LURAP1Q96LR2 239 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 AMBRA1Q9C0C7 1298 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 AP4B1Q9Y6B7 739 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 SPG11Q96JI7 2443 aa16.97■□□□□ 0.31
CCDC9-205ENST00000600117 A0A0B4J2E0 115 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 A0A1B0GX12 115 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 CPSF4LA6NMK7 179 aaKnown RBP16.96■□□□□ 0.31
CCDC9-205ENST00000600117 H3BML4 177 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 BCKDKO14874 412 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 THY1P04216 161 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 PEPDP12955 493 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 CPN1P15169 458 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 PTGER4P35408 488 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 CLDN15P56746 228 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 SELENBP1Q13228 472 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 FLOT2Q14254 428 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 BCL2A1Q16548 175 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 C3AR1Q16581 482 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 IQCCQ4KMZ1 466 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 EMC4Q5J8M3 183 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 ZNF613Q6PF04 617 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 DEF8Q6ZN54 512 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 Q6ZPB1 254 aaPredicted RBP16.96■□□□□ 0.31
CCDC9-205ENST00000600117 FAM57AQ8TBR7 257 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 TRIM15Q9C019 465 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 PRDM14Q9GZV8 571 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 TMEM27Q9HBJ8 222 aa16.96■□□□□ 0.31
CCDC9-205ENST00000600117 TMED7-TICAM2A0A0A6YYA0 188 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 TMEM72A0PK05 275 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 AQP12BA6NM10 295 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 H0YC42 278 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 SLC19A2O60779 497 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 STAMBPO95630 424 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 IFNW1P05000 195 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 TPD52P55327 224 aaPredicted RBP16.95■□□□□ 0.3
CCDC9-205ENST00000600117 CLDN20P56880 219 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 VLDLRP98155 873 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 POMZP3Q6PJE2 187 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 GGNQ86UU5 652 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 AQP12AQ8IXF9 295 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 ADAMTS16Q8TE57 1224 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 ADGRG7Q96K78 797 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 LRGUKQ96M69 825 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 TMEM185BQ9H7F4 350 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 C12orf10Q9HB07 376 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 RPS6KB2Q9UBS0 482 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 CHRNA9Q9UGM1 479 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 ACAD8Q9UKU7 415 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 TMED7Q9Y3B3 224 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 KLF2Q9Y5W3 355 aaPredicted RBP16.95■□□□□ 0.3
CCDC9-205ENST00000600117 ENPP4Q9Y6X5 453 aa16.95■□□□□ 0.3
CCDC9-205ENST00000600117 A0A1B0GUH1 482 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 TRAPPC13A5PLN9 417 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 FFAR1O14842 300 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 STSP08842 583 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 ABOP16442 354 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 SUCLG1P53597 346 aaKnown RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 CDH12P55289 794 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 RBPJQ06330 500 aa16.94■□□□□ 0.3
CCDC9-205ENST00000600117 PIN1Q13526 163 aaPredicted RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 CTU2Q2VPK5 515 aaKnown RBP16.94■□□□□ 0.3
CCDC9-205ENST00000600117 GXYLT1Q4G148 440 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms