RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 SWT1Q5T5J6 900 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 PGM2L1Q6PCE3 622 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ULK3Q6PHR2 472 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 B3GNT6Q6ZMB0 384 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 C3P1Q6ZMU1 363 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ATG4DQ86TL0 474 aaPredicted RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 DHFR2Q86XF0 187 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 DDIT4LQ96D03 193 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 ADGRG7Q96K78 797 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 CADM1Q9BY67 442 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 POLR2J2Q9GZM3 115 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 MEMO1Q9Y316 297 aa12.92□□□□□ -0.34
VRK3-213ENST00000597215 FASNP49327 2511 aaKnown RBP12.92□□□□□ -0.34
VRK3-213ENST00000597215 PHF3Q92576 2039 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 HIVEP3Q5T1R4 2406 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 A0A0B4J2E0 115 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 A0A0J9YW62 118 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 A0A1B0GX12 115 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 ELOA3DA6NLF2 546 aaPredicted RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 CPSF4LA6NMK7 179 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 CLCA1A8K7I4 914 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 H0YC42 278 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TNFSF11O14788 317 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 LRRTM2O43300 516 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 PRKD3O94806 890 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 IFNW1P05000 195 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TFPIP10646 304 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 CCNA2P20248 432 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 ATP6V1B2P21281 511 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 SHC1P29353 583 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 EIF1AXP47813 144 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 CLK1P49759 484 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 TPD52P55327 224 aaPredicted RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 CLDN15P56746 228 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 GABPB1Q06547 395 aaPredicted RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 ELOA3BQ3SY89 546 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 NSUN5P2Q63ZY6 315 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TMEM211Q6ICI0 200 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 LCN8Q6JVE9 175 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 MTFR2Q6P444 385 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 RPTNQ6XPR3 784 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 FJX1Q86VR8 437 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 ELOA3Q8NG57 546 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 OR10D3Q8NH80 312 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 RNF217Q8TC41 542 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 ADAMTS16Q8TE57 1224 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 POP5Q969H6 163 aaKnown RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 LRGUKQ96M69 825 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 OR5B2Q96R09 309 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TRIB1Q96RU8 372 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TRIM15Q9C019 465 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 MMADHCQ9H3L0 296 aaPredicted RBP12.91□□□□□ -0.34
VRK3-213ENST00000597215 CALHM2Q9HA72 323 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 TIGARQ9NQ88 270 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 SLC5A6Q9Y289 635 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 HDGFL3Q9Y3E1 203 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 FAM215AQ9Y5M1 114 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 RELNP78509 3460 aa12.91□□□□□ -0.34
VRK3-213ENST00000597215 ARHGAP21Q5T5U3 1957 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 TRAPPC13A5PLN9 417 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 CD8B2A6NJW9 211 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 CXCL13O43927 109 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 IFNA8P32881 189 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 CDH12P55289 794 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 PER3P56645 1201 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 TAS2R41P59536 307 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 MS4A2Q01362 244 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 SGCBQ16585 318 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 RTL6Q6ICC9 239 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 ADGRE4PQ86SQ3 457 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 FAM86B1Q8N7N1 296 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 PHF10Q8WUB8 498 aaKnown RBP12.9□□□□□ -0.34
VRK3-213ENST00000597215 OSTF1Q92882 214 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 SLC38A4Q969I6 547 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 PYURFQ96I23 114 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 UCN2Q96RP3 112 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 DMRTA2Q96SC8 542 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 AMBRA1Q9C0C7 1298 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 OR11A1Q9GZK7 315 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 COQ10BQ9H8M1 238 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 ZNF175Q9Y473 711 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 V9GYQ6 96 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 MPDZO75970 2070 aa12.9□□□□□ -0.34
VRK3-213ENST00000597215 A0A087WUJ7 227 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 A8MVM7 634 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 ACOT8O14734 319 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 CHP2O43745 196 aa12.89□□□□□ -0.35
VRK3-213ENST00000597215 OR5F1O95221 314 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms