RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 EXOSC2Q13868 293 aaKnown RBP15.22■□□□□ 0.03
LIG1-206ENST00000594067 GRK1Q15835 563 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 FCRL6Q6DN72 434 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 FAAH2Q6GMR7 532 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 LUZP2Q86TE4 346 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 TPRA1Q86W33 373 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SIAH3Q8IW03 269 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 TOMM5Q8N4H5 51 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 PCNPQ8WW12 178 aaKnown RBP15.22■□□□□ 0.03
LIG1-206ENST00000594067 ADAMTS14Q8WXS8 1223 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 CNOT9Q92600 299 aaKnown RBP15.22■□□□□ 0.03
LIG1-206ENST00000594067 GHSRQ92847 366 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 C1QTNF7Q9BXJ2 289 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 OBP2AQ9NY56 170 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 MRPS7Q9Y2R9 242 aaKnown RBP15.22■□□□□ 0.03
LIG1-206ENST00000594067 CDK2AP1O14519 115 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 GPR171O14626 319 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 PTP4A3O75365 173 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 OR7A10O76100 309 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 UGT2B7P16662 529 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SLC2A5P22732 501 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SSTR2P30874 369 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 ST3GAL2Q16842 350 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 GSG1Q2KHT4 349 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 TP53I3Q53FA7 332 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 RPL13AP3Q6NVV1 102 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 FIGLAQ6QHK4 219 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 PXKQ7Z7A4 578 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 CDRT4Q8N9R6 151 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SCARF2Q96GP6 870 aaPredicted RBP15.22■□□□□ 0.03
LIG1-206ENST00000594067 UCKL1Q9NWZ5 548 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 GDE1Q9NZC3 331 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 TMEM5Q9Y2B1 443 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 C2orf16Q68DN1 1984 aa15.22■□□□□ 0.03
LIG1-206ENST00000594067 SNRPBP14678 240 aaKnown RBP15.21■□□□□ 0.03
LIG1-206ENST00000594067 ZNF3P17036 446 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 RAB3BP20337 219 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 GDI1P31150 447 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 CCR6P51684 374 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 POU6F2P78424 691 aaPredicted RBP15.21■□□□□ 0.03
LIG1-206ENST00000594067 ZNF687Q8N1G0 1237 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 BEST4Q8NFU0 473 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 OR4D9Q8NGE8 314 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 SLC22A18Q96BI1 424 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 TRPV4Q9HBA0 871 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 TMEM27Q9HBJ8 222 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 DUSP22Q9NRW4 184 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 FLRT3Q9NZU0 649 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 MEIKINA0A087WXM9 373 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 URADA6NGE7 173 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 SC5DO75845 299 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 PVRP15151 417 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 CD53P19397 219 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 ZNF81P51508 661 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 TAS2R43P59537 309 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 HSF2Q03933 536 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 GPM6BQ13491 265 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 TRAM1Q15629 374 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 CLLU1Q5K131 121 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 DMKNQ6E0U4 476 aaPredicted RBP15.21■□□□□ 0.03
LIG1-206ENST00000594067 ESPNLQ6ZVH7 1005 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 COMMD7Q86VX2 200 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 OR51L1Q8NGJ5 315 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 ZMYND19Q96E35 227 aaPredicted RBP15.21■□□□□ 0.03
LIG1-206ENST00000594067 ZFP3Q96NJ6 502 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 TMEM168Q9H0V1 697 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 CCDC86Q9H6F5 360 aaKnown RBP15.21■□□□□ 0.03
LIG1-206ENST00000594067 IL21RQ9HBE5 538 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 DLL4Q9NR61 685 aa15.21■□□□□ 0.03
LIG1-206ENST00000594067 OR6C74A6NCV1 312 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ADAM11O75078 769 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SULT1A3P0DMM9 295 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SULT1A4P0DMN0 295 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SRP54P61011 504 aaKnown RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 DGCR2P98153 550 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 EXOSC6Q5RKV6 272 aaKnown RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 NUDT18Q6ZVK8 323 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ABHD13Q7L211 337 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SLC51BQ86UW2 128 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 RBP7Q96R05 134 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SFXN1Q9H9B4 322 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 A0A1B0GWA3 101 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 GNB5O14775 395 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 FMO6PO60774 539 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 IFNA7P01567 189 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 NGFRP08138 427 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 ANKRD34CP0C6C1 535 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 DNASE1P24855 282 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 NRG3P56975 720 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 AANATQ16613 207 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 PXDC1Q5TGL8 231 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 MTFR2Q6P444 385 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 TMEM65Q6PI78 240 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.2■□□□□ 0.02
LIG1-206ENST00000594067 CAMKVQ8NCB2 501 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 MSANTD3Q96H12 275 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 COQ3Q9NZJ6 369 aa15.2■□□□□ 0.02
LIG1-206ENST00000594067 COPZ2Q9P299 210 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms