RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 APOPT1Q96IL0 206 aa15.36■□□□□ 0.05
RETREG3-212ENST00000593251 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
RETREG3-212ENST00000593251 CDC42EP3Q9UKI2 254 aa15.36■□□□□ 0.05
RETREG3-212ENST00000593251 RNF103-CHMP3A0A140T963 221 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 TLDC2A0PJX2 215 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ELOA3DA6NLF2 546 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-212ENST00000593251 LY6HO94772 140 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 G6PDP11413 515 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ZNF16P17020 682 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-212ENST00000593251 CCNA2P20248 432 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 PRPS1L1P21108 318 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 DSCR9P59020 149 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 VLDLRP98155 873 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 GABRA6Q16445 453 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ARHGAP11BQ3KRB8 267 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ELOA3BQ3SY89 546 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 BHLHB9Q6PI77 547 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 EIF3MQ7L2H7 374 aaKnown RBP15.35■□□□□ 0.05
RETREG3-212ENST00000593251 C16orf62Q7Z3J2 963 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ELOA3Q8NG57 546 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 OR52E4Q8NGH9 312 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ZNF563Q8TA94 476 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 SLC25A43Q8WUT9 341 aaPredicted RBP15.35■□□□□ 0.05
RETREG3-212ENST00000593251 FAM168AQ92567 244 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 TUBGCP3Q96CW5 907 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ZHX1-C8orf76Q96EF9 292 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 CCDC106Q9BWC9 280 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 BEX2Q9BXY8 128 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ZNF350Q9GZX5 532 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 OR51I1Q9H343 314 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 PPCSQ9HAB8 311 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ASB6Q9NWX5 421 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 TAS2R16Q9NYV7 291 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ZDHHC2Q9UIJ5 367 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 ATP23Q9Y6H3 246 aa15.35■□□□□ 0.05
RETREG3-212ENST00000593251 DUXAA6NLW8 204 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 SPAG7O75391 227 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 MRPL33O75394 65 aaKnown RBP15.34■□□□□ 0.05
RETREG3-212ENST00000593251 AK1P00568 194 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 ITGA5P08648 1049 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 SLC25A16P16260 332 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 PGM1P36871 562 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 PDK3Q15120 406 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 DEPDC4Q8N2C3 294 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 ARIH2OSQ8N7S6 290 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 WDR31Q8NA23 367 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 PIGXQ8TBF5 258 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 C10orf105Q8TEF2 133 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 CHRNA9Q9UGM1 479 aa15.34■□□□□ 0.05
RETREG3-212ENST00000593251 H7C417 338 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 PMS2P2O95744 297 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 OR12D1P0DN82 309 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 IGHV4-31P0DP07 118 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 APOBEC1P41238 236 aaKnown RBP15.33■□□□□ 0.04
RETREG3-212ENST00000593251 OR2B6P58173 313 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 SLC25A3Q00325 362 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 SRSF2Q01130 221 aaKnown RBP15.33■□□□□ 0.04
RETREG3-212ENST00000593251 KRTAP24-1Q3LI83 254 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 CYB5R2Q6BCY4 276 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 TYW3Q6IPR3 259 aaKnown RBP15.33■□□□□ 0.04
RETREG3-212ENST00000593251 TNFAIP8L2Q6P589 184 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-212ENST00000593251 CASP12Q6UXS9 341 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 FAM71CQ8NEG0 241 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 OR4A15Q8NGL6 344 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 KIF18AQ8NI77 898 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 RAB8BQ92930 207 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 MUS81Q96NY9 551 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 INPP5KQ9BT40 448 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 EXD2Q9NVH0 621 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 MKS1Q9NXB0 559 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 MALT1Q9UDY8 824 aa15.33■□□□□ 0.04
RETREG3-212ENST00000593251 SPIN1Q9Y657 262 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-212ENST00000593251 CLDN24A6NM45 220 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 GPR171O14626 319 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 KIAA0513O60268 411 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 CLDN8P56748 225 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 PLAURQ03405 335 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 FUT5Q11128 374 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 OR7E24Q6IFN5 339 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 ZNF544Q6NX49 715 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 EMBQ6PCB8 327 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 IL17RELQ6ZVW7 336 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 ANKRD46Q86W74 232 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 ADGRG3Q86Y34 549 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 TCP10LQ8TDR4 215 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 XAGE5Q8WWM1 108 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 ZG16BQ96DA0 208 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 PPP1R36Q96LQ0 422 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 HDGFL3Q9Y3E1 203 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 WDR45Q9Y484 360 aa15.32■□□□□ 0.04
RETREG3-212ENST00000593251 SVEP1Q4LDE5 3571 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.043e-8■■■■□ 20.4
RETREG3-212ENST00000593251 ATP6V1G2-DDX39BF2Z307 99 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 ANKRD28O15084 1053 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 CPSF4O95639 269 aaKnown RBP15.31■□□□□ 0.04
RETREG3-212ENST00000593251 F12P00748 615 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-212ENST00000593251 MAGEA8P43361 318 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 EFNA4P52798 201 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 SLC16A1P53985 500 aa15.31■□□□□ 0.04
RETREG3-212ENST00000593251 FRRS1Q6ZNA5 592 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms