RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SKP2Q13309 424 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 CBFBQ13951 182 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 CHRFAM7AQ494W8 412 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 XKR7Q5GH72 579 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 C6orf136Q5SQH8 315 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 TIMM23BQ5SRD1 257 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 C6orf52Q5T4I8 152 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 C9orf135Q5VTT2 229 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 TMPPEQ6ZT21 453 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 C6orf120Q7Z4R8 191 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 GALNT5Q7Z7M9 940 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 CCDC103Q8IW40 242 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 CLECL1Q8IZS7 167 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ZNF525Q8N782 197 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ZNF527Q8NB42 609 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 TOR1AIP2Q8NFQ8 470 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 OR56A1Q8NGH5 318 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 OR52E4Q8NGH9 312 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ZG16BQ96DA0 208 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 MUCL1Q96DR8 90 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ARL5BQ96KC2 179 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 C7orf26Q96N11 449 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 SORT1Q99523 831 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 LAT2Q9GZY6 243 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 ZDHHC2Q9UIJ5 367 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 SLC25A15Q9Y619 301 aa10.23□□□□□ -0.77
LIG3-207ENST00000586119 CIB4A0PJX0 185 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 CLDN24A6NM45 220 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 ZNF716A6NP11 495 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 ZNF724A8MTY0 619 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 SULT2B1O00204 365 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 DNAJA2O60884 412 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 SKAP2O75563 359 aaPredicted RBP10.22□□□□□ -0.77
LIG3-207ENST00000586119 LYPLA1O75608 230 aaPredicted RBP10.22□□□□□ -0.77
LIG3-207ENST00000586119 UGT2B17O75795 530 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 UBTFL6P0CB48 400 aaPredicted RBP10.22□□□□□ -0.77
LIG3-207ENST00000586119 TFPIP10646 304 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 G6PDP11413 515 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 CCNA2P20248 432 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 CD40P25942 277 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 SOAT1P35610 550 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 HPCAL1P37235 193 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 PLAURQ03405 335 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 ZNF141Q15928 474 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 PGS1Q32NB8 556 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 AGAP6Q5VW22 663 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 SLC22A25Q6T423 547 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 RIMKLAQ8IXN7 391 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 LRRC34Q8IZ02 419 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 UBE2J2Q8N2K1 259 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 WDR31Q8NA23 367 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 PPP3R2Q96LZ3 170 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 TNFRSF13CQ96RJ3 184 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 GRIP2Q9C0E4 1043 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 OR11A1Q9GZK7 315 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 C20orf27Q9GZN8 174 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 CCDC134Q9H6E4 229 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 CTPS2Q9NRF8 586 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 ACER3Q9NUN7 267 aa10.22□□□□□ -0.77
LIG3-207ENST00000586119 SVEP1Q4LDE5 3571 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 GOLGA8QA0A0J9YX86 632 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 GOLGA8OA6NCC3 632 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 CCT8L1PA6NM43 557 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 GOLGA8NF8WBI6 632 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 M0R1B8 84 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 CSTAP01040 98 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 IFNA2P01563 188 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 ITGA5P08648 1049 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 DDX5P17844 614 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 RYKP34925 604 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 PGM1P36871 562 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 MDH1P40925 334 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 FABP6P51161 128 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 SLC25A3Q00325 362 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 GABRA6Q16445 453 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 KRTAP24-1Q3LI83 254 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 LSM12Q3MHD2 195 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 SYT14P1Q58G82 188 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 FBXW9Q5XUX1 488 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 ABLIM2Q6H8Q1 611 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 OR4F3Q6IEY1 312 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 C3orf33Q6P1S2 294 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 IL17RELQ6ZVW7 336 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 MTDHQ86UE4 582 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 ZNF781Q8N8C0 355 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 FNDC5Q8NAU1 212 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 SFXN5Q8TD22 340 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 TMEM158Q8WZ71 300 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 RAB8BQ92930 207 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 ADAD1Q96M93 576 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 DHRS9Q9BPW9 319 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 USB1Q9BQ65 265 aaKnown RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 DUSP26Q9BV47 211 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 OR51I1Q9H343 314 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 BARX1Q9HBU1 254 aaPredicted RBP10.21□□□□□ -0.77
LIG3-207ENST00000586119 CBLN4Q9NTU7 201 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 FAM53CQ9NYF3 392 aa10.21□□□□□ -0.77
LIG3-207ENST00000586119 POU2F3Q9UKI9 436 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms