RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 CCDC154A6NI56 674 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 SLCO1B7G3V0H7 640 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 NR2F1P10589 423 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 IL7RP16871 459 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 BGNP21810 368 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 PCSK6P29122 969 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 IDH2P48735 452 aaKnown RBP12.14□□□□□ -0.47
GGA3-208ENST00000579743 OR2B6P58173 313 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 SLC35A1P78382 337 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 TGFBR3Q03167 851 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 NRF1Q16656 503 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 SPANXN4Q5MJ08 99 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 C1QTNF12Q5T7M4 302 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 AGAP6Q5VW22 663 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 AP1ARQ63HQ0 302 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 OGFOD2Q6N063 350 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 ZNF621Q6ZSS3 439 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 PEX5LQ8IYB4 626 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 ZNF440Q8IYI8 595 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 GLB1L3Q8NCI6 653 aaPredicted RBP12.14□□□□□ -0.47
GGA3-208ENST00000579743 IGFBPL1Q8WX77 278 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 ZNF300Q96RE9 604 aaPredicted RBP12.14□□□□□ -0.47
GGA3-208ENST00000579743 CCDC106Q9BWC9 280 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 PARD6BQ9BYG5 372 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 ARMC7Q9H6L4 198 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 CALML5Q9NZT1 146 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 TMEM181Q9P2C4 612 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 PRSS50Q9UI38 385 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 KCNE5Q9UJ90 142 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 HAO1Q9UJM8 370 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 ROS1P08922 2347 aa12.14□□□□□ -0.47
GGA3-208ENST00000579743 FAM234BA2RU67 622 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 OR5H1A6NKK0 313 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 SCN2BO60939 215 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 ANP32DO95626 131 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 PGRP06401 933 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 DBIP07108 87 aaKnown RBP12.13□□□□□ -0.47
GGA3-208ENST00000579743 DHRS4L1P0CG22 281 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 BMP4P12644 408 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 COX5AP20674 150 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 PTAFRP25105 342 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 POLR2HP52434 150 aaKnown RBP12.13□□□□□ -0.47
GGA3-208ENST00000579743 COPZ1P61923 177 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 FAPQ12884 760 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 ZSWIM7Q19AV6 140 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 ATG16L1Q676U5 607 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 FRRS1Q6ZNA5 592 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 RNF130Q86XS8 419 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 FAM71CQ8NEG0 241 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 ADAD1Q96M93 576 aaKnown RBP12.13□□□□□ -0.47
GGA3-208ENST00000579743 GRIP2Q9C0E4 1043 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 THUMPD1Q9NXG2 353 aaKnown RBP12.13□□□□□ -0.47
GGA3-208ENST00000579743 TAS2R16Q9NYV7 291 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 UPB1Q9UBR1 384 aa12.13□□□□□ -0.47
GGA3-208ENST00000579743 CFAP73A6NFT4 308 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 AGAP5A6NIR3 686 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 OVOL3O00110 214 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 HMGN4O00479 90 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 ZNF208O43345 1280 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 PGM3O95394 542 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 IL6P05231 212 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 DANCRP0C864 163 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 CCNA2P20248 432 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 IGHV1-2P23083 117 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 CDH11P55287 796 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 NME5P56597 212 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 CHRNEQ04844 493 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 TNK1Q13470 666 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 MAPK14Q16539 360 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 GSTA3Q16772 222 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 NXNQ6DKJ4 435 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 SLC22A25Q6T423 547 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 ZNF433Q8N7K0 673 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 WDR60Q8WVS4 1066 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 ZNF75CPQ92670 426 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 SORT1Q99523 831 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 TRIM2Q9C040 744 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 AIG1Q9NVV5 245 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.12□□□□□ -0.47
GGA3-208ENST00000579743 ING1Q9UK53 422 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 ZNF232Q9UNY5 417 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 SLC9A8Q9Y2E8 581 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 V9GYY5 206 aaPredicted RBP12.12□□□□□ -0.47
GGA3-208ENST00000579743 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
GGA3-208ENST00000579743 TMED7-TICAM2A0A0A6YYA0 188 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 CENPVL1A0A0U1RR11 272 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 FAAHO00519 579 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms