RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 KIAA0040Q15053 153 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 PDCD2Q16342 344 aaPredicted RBP7.55□□□□□ -1.2
BRIP1-204ENST00000579028 IMPG1Q17R60 797 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 TEX35Q5T0J7 233 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 DCST2Q5T1A1 773 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 TSPO2Q5TGU0 170 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 C9orf135Q5VTT2 229 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 CDC73Q6P1J9 531 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 KLHL24Q6TFL4 600 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 SHISA2Q6UWI4 295 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 CASP12Q6UXS9 341 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 TMCO5AQ8N6Q1 288 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 LRRC17Q8N6Y2 441 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 WDR60Q8WVS4 1066 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 TMEM186Q96B77 213 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 PPCDCQ96CD2 204 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 FAM120BQ96EK7 910 aaKnown RBP7.55□□□□□ -1.2
BRIP1-204ENST00000579028 L3HYPDHQ96EM0 354 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 METTL2AQ96IZ6 378 aaKnown RBP7.55□□□□□ -1.2
BRIP1-204ENST00000579028 SLC38A2Q96QD8 506 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 DOK1Q99704 481 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 FUT8Q9BYC5 575 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 REEP4Q9H6H4 257 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 OBP2BQ9NPH6 170 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 SIRT3Q9NTG7 399 aaPredicted RBP7.55□□□□□ -1.2
BRIP1-204ENST00000579028 UPB1Q9UBR1 384 aa7.55□□□□□ -1.2
BRIP1-204ENST00000579028 UTP11Q9Y3A2 253 aaKnown RBP7.55□□□□□ -1.2
BRIP1-204ENST00000579028 MEGF8Q7Z7M0 2845 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 RGS9O75916 674 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 CRYAAP02489 173 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 HMGN2P05204 90 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 IGFBP1P08833 259 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 IFNGR1P15260 489 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 DDX5P17844 614 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 EPHA1P21709 976 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 PAX7P23759 505 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ATP5F1P24539 256 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 MAGEA8P43361 318 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 PRKAA2P54646 552 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 H3F3AP84243 136 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 NAAAQ02083 359 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 MERTKQ12866 999 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SKP2Q13309 424 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 PDE7AQ13946 482 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 LASP1Q14847 261 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 C3orf36Q3SXR2 165 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SHQ1Q6PI26 577 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 VHLLQ6RSH7 139 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SLC22A9Q8IVM8 553 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 CCDC103Q8IW40 242 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SVOPLQ8N434 492 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ZNF614Q8N883 585 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 TMEM234Q8WY98 164 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ARL5BQ96KC2 179 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 NAPGQ99747 312 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 CCT7Q99832 543 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 KCNS3Q9BQ31 491 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 THUMPD3Q9BV44 507 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 LAT2Q9GZY6 243 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 GSTO2Q9H4Y5 243 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ZNF442Q9H7R0 627 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ZCCHC3Q9NUD5 404 aaKnown RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 ACER3Q9NUN7 267 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 PARPBPQ9NWS1 579 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 HIF1ANQ9NWT6 349 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 TMEM216Q9P0N5 145 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 USP22Q9UPT9 525 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SLC9A8Q9Y2E8 581 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 HDGFL3Q9Y3E1 203 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 GRIP1Q9Y3R0 1128 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 CCL27Q9Y4X3 112 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 PCDHGB1Q9Y5G3 927 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 FLVCR1Q9Y5Y0 555 aa7.54□□□□□ -1.2
BRIP1-204ENST00000579028 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
BRIP1-204ENST00000579028 TMEM129A0AVI4 362 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 TRIM49D1C9J1S8 452 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 hCG_2039718K7EN88 272 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 KLF11O14901 512 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 URI1O94763 535 aaPredicted RBP7.53□□□□□ -1.2
BRIP1-204ENST00000579028 MSMBP08118 114 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 TFPIP10646 304 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 PRPH2P23942 346 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 APOBEC1P41238 236 aaKnown RBP7.53□□□□□ -1.2
BRIP1-204ENST00000579028 SLC1A3P43003 542 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 CLK1P49759 484 aaKnown RBP7.53□□□□□ -1.2
BRIP1-204ENST00000579028 GUCA2AQ02747 115 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 HIKESHIQ53FT3 197 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 PDZK1Q5T2W1 519 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 ZCCHC24Q8N2G6 241 aaKnown RBP7.53□□□□□ -1.2
BRIP1-204ENST00000579028 TEX29Q8N6K0 151 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 SPATA4Q8NEY3 305 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 NUP37Q8NFH4 326 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 OR4F15Q8NGB8 312 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 CLDND2Q8NHS1 167 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 ADAMTS15Q8TE58 950 aa7.53□□□□□ -1.2
BRIP1-204ENST00000579028 CHMP6Q96FZ7 201 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms