RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 NANOGNBQ7Z5D8 188 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 SYCE1Q8N0S2 351 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 PYROXD2Q8N2H3 581 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 TCAIMQ8N3R3 496 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 OR2T34Q8NGX1 318 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 CRYGNQ8WXF5 182 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 ISG20Q96AZ6 181 aaKnown RBP3.83□□□□□ -1.8
NUP88-213ENST00000576862 DYNLL2Q96FJ2 89 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 PSKH2Q96QS6 385 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 FUNDC2Q9BWH2 189 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 COA1Q9GZY4 146 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 RAB17Q9H0T7 212 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 RNF41Q9H4P4 317 aaPredicted RBP3.83□□□□□ -1.8
NUP88-213ENST00000576862 LRRC19Q9H756 370 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 UCK1Q9HA47 277 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 SPACA1Q9HBV2 294 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 ADGRL4Q9HBW9 690 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 ACOXLQ9NUZ1 547 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 KCNN3Q9UGI6 736 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 RSPH14Q9UHP6 348 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 MROH7-TTC4A0A0A0MT08 1334 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 UBE4BO95155 1302 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 C10orf71Q711Q0 1435 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 DUOX1Q9NRD9 1551 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 C4AP0C0L4 1744 aa3.83□□□□□ -1.8
NUP88-213ENST00000576862 ARAP2Q8WZ64 1704 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 A0A0A6YYD4 124 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 A0A1B0GTQ1 180 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 TTC26A0AVF1 554 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 SLC28A1O00337 649 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 TBX19O60806 448 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 GMNNO75496 209 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 SCGB2A1O75556 95 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 CBR3O75828 277 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 FCARP24071 287 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 UCP1P25874 307 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 HTR2BP41595 481 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 ARHGDIBP52566 201 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 GEMP55040 296 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 RPS4XP62701 263 aaKnown RBP3.82□□□□□ -1.8
NUP88-213ENST00000576862 PAX2Q02962 417 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 KARSQ15046 597 aaKnown RBP3.82□□□□□ -1.8
NUP88-213ENST00000576862 PPP1R3AQ16821 1122 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 CNPY1Q3B7I2 92 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 SBK1Q52WX2 424 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 ACER2Q5QJU3 275 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 ARMC12Q5T9G4 340 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 ATL3Q6DD88 541 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 CLEC6AQ6EIG7 209 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 DEGS2Q6QHC5 323 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 LUZP1Q86V48 1076 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 OR4A16Q8NH70 328 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 STARD8Q92502 1023 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 ESR2Q92731 530 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 BIRC7Q96CA5 298 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 TRIM62Q9BVG3 475 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 TMEM117Q9H0C3 514 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 VPS54Q9P1Q0 977 aa3.82□□□□□ -1.8
NUP88-213ENST00000576862 UBR3Q6ZT12 1888 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 BRWD3Q6RI45 1802 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 SBF2Q86WG5 1849 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 NID2Q14112 1375 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 ROBO3Q96MS0 1386 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 EP400Q96L91 3159 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 IQANK1A0A1B0GTG1 560 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 HEATR9A2RTY3 570 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 H3BQV1 296 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 K7ERI5 159 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 LGALS8O00214 317 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 MBD3O95983 291 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 CSTAP01040 98 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 IGHV3-9P01782 118 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 CRYGCP07315 174 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 GCFC2P16383 781 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 NDST1P52848 882 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 IGLV3-21P80748 117 aaPredicted RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 PPIDQ08752 370 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 SRSF5Q13243 272 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 SNTB2Q13425 540 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 PDE7AQ13946 482 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 IL18Q14116 193 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 GNA13Q14344 377 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 EXOSC7Q15024 291 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 CEBPEQ15744 281 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 HAGHQ16775 308 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 RGS21Q2M5E4 152 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 SLC36A3Q495N2 470 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 APOBEC3HQ6NTF7 200 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 CDC42EP5Q6NZY7 148 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 SERPINA12Q8IW75 414 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 CSGALNACT2Q8N6G5 542 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 TSEN15Q8WW01 171 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 ZNF416Q9BWM5 594 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 VCX2Q9H322 139 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 SYNDIG1Q9H7V2 258 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 TMEM165Q9HC07 324 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 ZCCHC3Q9NUD5 404 aaKnown RBP3.81□□□□□ -1.8
NUP88-213ENST00000576862 TUBGCP4Q9UGJ1 667 aa3.81□□□□□ -1.8
NUP88-213ENST00000576862 IKZF3Q9UKT9 509 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms