RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 LAMP3Q9UQV4 416 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 GPR45Q9Y5Y3 372 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 DNHD1Q96M86 4753 aa18.3■□□□□ 0.52
LITAF-205ENST00000570904 FN1P02751 2386 aaKnown RBP18.3■□□□□ 0.52
LITAF-205ENST00000570904 AP3D1O14617 1153 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 SNNO75324 88 aaPredicted RBP18.29■□□□□ 0.52
LITAF-205ENST00000570904 CD3EP07766 207 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 PAX1P15863 534 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 CCNA2P20248 432 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 COX20Q5RI15 118 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 ZNF621Q6ZSS3 439 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 ZNF100Q8IYN0 542 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 TRIML2Q8N7C3 387 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 TRNT1Q96Q11 434 aaKnown RBP18.29■□□□□ 0.52
LITAF-205ENST00000570904 ZBTB18Q99592 522 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 ESRP2Q9H6T0 727 aaKnown RBP18.29■□□□□ 0.52
LITAF-205ENST00000570904 NGBQ9NPG2 151 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 ZNF701Q9NV72 531 aaPredicted RBP18.29■□□□□ 0.52
LITAF-205ENST00000570904 THAP1Q9NVV9 213 aa18.29■□□□□ 0.52
LITAF-205ENST00000570904 TLN2Q9Y4G6 2542 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 FAM171A2A8MVW0 826 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 HDAC3O15379 428 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 CNOT4O95628 575 aaKnown RBP18.28■□□□□ 0.52
LITAF-205ENST00000570904 IGHV1-2P23083 117 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 IDH2P48735 452 aaKnown RBP18.28■□□□□ 0.52
LITAF-205ENST00000570904 ATP5J2P56134 94 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 BSPH1Q075Z2 132 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 NXNQ6DKJ4 435 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 ADAM5Q6NVV9 412 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 DNAJC14Q6Y2X3 702 aaPredicted RBP18.28■□□□□ 0.52
LITAF-205ENST00000570904 MTDHQ86UE4 582 aaKnown RBP18.28■□□□□ 0.52
LITAF-205ENST00000570904 ADGRG3Q86Y34 549 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 KBTBD8Q8NFY9 601 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 PIWIL2Q8TC59 973 aaKnown RBP18.28■□□□□ 0.52
LITAF-205ENST00000570904 EMC3Q9P0I2 261 aa18.28■□□□□ 0.52
LITAF-205ENST00000570904 IGKV3D-15A0A087WSY6 115 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 TRPC5OSA6NMA1 111 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 ZNF716A6NP11 495 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 PMS2P2O95744 297 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 IGHV3-9P01782 118 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 SOD3P08294 240 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 COX5AP20674 150 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 RPS4XP62701 263 aaKnown RBP18.27■□□□□ 0.52
LITAF-205ENST00000570904 PPA1Q15181 289 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 LRRC74BQ6ZQY2 392 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 WDR60Q8WVS4 1066 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 FBXW5Q969U6 566 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 ZHX1-C8orf76Q96EF9 292 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 LIPT1Q9Y234 373 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 HDGFL3Q9Y3E1 203 aa18.27■□□□□ 0.52
LITAF-205ENST00000570904 CSPG4Q6UVK1 2322 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 DPRXA6NFQ7 191 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 AGAP5A6NIR3 686 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 RAMP1O60894 148 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 TMCC2O75069 709 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 NR2F1P10589 423 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 ANXA11P50995 505 aaKnown RBP18.26■□□□□ 0.51
LITAF-205ENST00000570904 OR2B6P58173 313 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 PDK3Q15120 406 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 ZNF672Q499Z4 452 aaPredicted RBP18.26■□□□□ 0.51
LITAF-205ENST00000570904 CCDC103Q8IW40 242 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 USB1Q9BQ65 265 aaKnown RBP18.26■□□□□ 0.51
LITAF-205ENST00000570904 SLC6A13Q9NSD5 602 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 NOSIPQ9Y314 301 aaKnown RBP18.26■□□□□ 0.51
LITAF-205ENST00000570904 CADP27708 2225 aa18.26■□□□□ 0.51
LITAF-205ENST00000570904 TMED7-TICAM2A0A0A6YYA0 188 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 TMEM72A0PK05 275 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 DANCRP0C864 163 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 GGT1P19440 569 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 RPS4Y1P22090 263 aaKnown RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 MAGOHP61326 146 aaKnown RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 TXNL4AP83876 142 aaKnown RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 SLC9B1Q4ZJI4 515 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 MRPL2Q5T653 305 aaKnown RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 ATG16L1Q676U5 607 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 CMIPQ8IY22 773 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 UBE2J2Q8N2K1 259 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 ZNF433Q8N7K0 673 aaPredicted RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 GLB1L3Q8NCI6 653 aaPredicted RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 PIGXQ8TBF5 258 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 SMAP2Q8WU79 429 aaPredicted RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 APH1AQ96BI3 265 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 NPAP1Q9NZP6 1156 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 OSGIN1Q9UJX0 560 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 TMED7Q9Y3B3 224 aa18.25■□□□□ 0.51
LITAF-205ENST00000570904 MAGED1Q9Y5V3 778 aaPredicted RBP18.25■□□□□ 0.51
LITAF-205ENST00000570904 RFXANKO14593 260 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 DNPH1O43598 174 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 RAD51DO75771 328 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 KRT75O95678 551 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 IL7RP16871 459 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 TACR3P29371 465 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 NTF4P34130 210 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 CDKN1AP38936 164 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 HTR3AP46098 478 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 CLK1P49759 484 aaKnown RBP18.24■□□□□ 0.51
LITAF-205ENST00000570904 POLR2HP52434 150 aaKnown RBP18.24■□□□□ 0.51
LITAF-205ENST00000570904 LRRC74AQ0VAA2 488 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 MAPK11Q15759 364 aa18.24■□□□□ 0.51
LITAF-205ENST00000570904 PDCD4Q53EL6 469 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms