RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PTGDR2Q9Y5Y4 395 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 KCNE3Q9Y6H6 103 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 B9A039 149 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 KCNAB3O43448 404 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 PDE5AO76074 875 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 SNUPNO95149 360 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 STAMBPO95630 424 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 TACSTD2P09758 323 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 UBTFL6P0CB48 400 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 MYL2P10916 166 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 PCMT1P22061 227 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 GIFP27352 417 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 APEX1P27695 318 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 CASQ1P31415 396 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 HPCAL1P37235 193 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 APOBEC1P41238 236 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 MAGEA8P43361 318 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 FAM174BQ3ZCQ3 159 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 SPDYE7PQ495Y7 208 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 RFTN2Q52LD8 501 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 SPATA19Q7Z5L4 167 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 OR2T11Q8NH01 316 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 PSMA8Q8TAA3 256 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 ARL5BQ96KC2 179 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 KCNS3Q9BQ31 491 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 CCDC106Q9BWC9 280 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 RAB1BQ9H0U4 201 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 OCEL1Q9H607 264 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC7A10Q9NS82 523 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 GPATCH2Q9NW75 528 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 PARPBPQ9NWS1 579 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 METRNQ9UJH8 293 aa10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-209ENST00000568569 G3V2L1 256 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 ANKRD28O15084 1053 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 SCAMP2O15127 329 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 VENTXO95231 258 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 CSTAP01040 98 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 ERCC1P07992 297 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 OR4A8P0C604 315 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 EGR1P18146 543 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 FKBP2P26885 142 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 GCAP28676 217 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 MPGP29372 298 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 IL2RGP31785 369 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 RPL3P39023 403 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 COMPP49747 757 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 PPOXP50336 477 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 IDH3GP51553 393 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 CDH15P55291 814 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 DNAJB13P59910 316 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 ACTG1P63261 375 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 EFNB3Q15768 340 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 ZNF141Q15928 474 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 TSPO2Q5TGU0 170 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 RINLQ6ZS11 566 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 RNF165Q6ZSG1 346 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 CCDC103Q8IW40 242 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 C3orf56Q8N813 242 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 SEMA6DQ8NFY4 1073 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 SFXN5Q8TD22 340 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 OR5P2Q8WZ92 322 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 DNAJA3Q96EY1 480 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 OR7D2Q96RA2 312 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 SDF2Q99470 211 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 KATNB1Q9BVA0 655 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 PLK3Q9H4B4 646 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 OBP2BQ9NPH6 170 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 CTPS2Q9NRF8 586 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 DCDC2Q9UHG0 476 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 ATP6V1HQ9UI12 483 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 PYCARDQ9ULZ3 195 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 PCDHB14Q9Y5E9 798 aa10.28□□□□□ -0.76
GTF3C1-209ENST00000568569 HEATR1Q9H583 2144 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 IGHV1-18A0A0C4DH31 117 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 CENPVL1A0A0U1RR11 272 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 TMEM114B3SHH9 223 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 LSM1O15116 133 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 LILRA1O75019 489 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 URI1O94763 535 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 CHEK2O96017 543 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 AK1P00568 194 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 CRYAAP02489 173 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 ABHD2P08910 425 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 LAMP1P11279 417 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 BCKDHAP12694 445 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 DAOP14920 347 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 PAX7P23759 505 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 SLC1A3P43003 542 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 CLK1P49759 484 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 DVL1P1P54792 670 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 OR2B6P58173 313 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 H3F3AP84243 136 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 CKAP4Q07065 602 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 SCGB2A2Q13296 93 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 GPR68Q15743 365 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 ADIPOQQ15848 244 aa10.27□□□□□ -0.77
GTF3C1-209ENST00000568569 GALNTL6Q49A17 601 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms