RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 WNT6Q9Y6F9 365 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 GNG14A0A1W2PPG7 69 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ANKRD20A5PA0PJZ0 165 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ARHGEF33A8MVX0 844 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 TGFBR3LH3BV60 316 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 CDC123O75794 336 aaPredicted RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ATG12O94817 140 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 APOC3P02656 99 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 CD1AP06126 327 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 HEXAP06865 529 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 PF4V1P10720 104 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ATF1P18846 271 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 RPL35P42766 123 aaKnown RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ARFIP1P53367 373 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 PCBP4P57723 403 aaKnown RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 SMAD4Q13485 552 aaKnown RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 SMAD2Q15796 467 aaKnown RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 C22orf39Q6P5X5 142 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 TSPAN33Q86UF1 283 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 CCDC36Q8IYA8 594 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ARMC10Q8N2F6 343 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 BPIFCQ8NFQ6 507 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ABHD4Q8TB40 342 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 SETD7Q8WTS6 366 aaKnown RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 OR5P2Q8WZ92 322 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 PPP1R16AQ96I34 528 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 ZNF607Q96SK3 696 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 SLAMF7Q9NQ25 335 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 DMRT3Q9NQL9 472 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 TEX10Q9NXF1 929 aaPredicted RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 IL20RAQ9UHF4 553 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 GPN3Q9UHW5 284 aaPredicted RBP5.04□□□□□ -1.6
LINC01541-202ENST00000568095 CCDC88CQ9P219 2028 aa5.04□□□□□ -1.6
LINC01541-202ENST00000568095 A0A087WUU8 490 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 A0A1W2PP55 124 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 GABARAPH6UMI1 98 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 RAD1O60671 282 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 PRAMEF2O60811 474 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 NDUFB6O95139 128 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 S100A6P06703 90 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 CTSLP07711 333 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 SMIM6P0DI80 62 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 EPXP11678 715 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 FOLR2P14207 255 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 DRD5P21918 477 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 VIPR2P41587 438 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 STAT5AP42229 794 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 H2BFSP57053 126 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 KRT33BQ14525 404 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 UBE2NLQ5JXB2 153 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 DMKNQ6E0U4 476 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TANGO2Q6ICL3 276 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 MED27Q6P2C8 311 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 AGTRAPQ6RW13 159 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 PGAP1Q75T13 922 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TMEM17Q86X19 198 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 SFTPA1Q8IWL2 248 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 BBS1Q8NFJ9 593 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 OR4D9Q8NGE8 314 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 OR2A12Q8NGT7 310 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 OR5W2Q8NH69 310 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 GLYATL2Q8WU03 294 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TREX2Q9BQ50 279 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 FNDC11Q9BVV2 318 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 SORBS1Q9BX66 1292 aaKnown RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 PITHD1Q9GZP4 211 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 MED11Q9P086 117 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 PLCL2Q9UPR0 1127 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 ERVK-19Q9WJR5 959 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TP53BP1Q12888 1972 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 RAB19A4D1S5 217 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 C5orf58C9J3I9 102 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 M0R3H8 397 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 GATCO43716 136 aaKnown RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 CREBL2O60519 120 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 RLN2P04090 185 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 ADH5P11766 374 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 RAB3BP20337 219 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 FPR3P25089 353 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 IMPA1P29218 277 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 CAPZA2P47755 286 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 GPR143P51810 404 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 MAZP56270 477 aaKnown RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TAS2R50P59544 299 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 MC2RQ01718 297 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 SRSF4Q08170 494 aaKnown RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 MAJINQ3KP22 176 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 FAM27D1Q5T7N8 215 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 FAM199XQ6PEV8 388 aaPredicted RBP5.03□□□□□ -1.6
LINC01541-202ENST00000568095 CRTC1Q6UUV9 634 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 NHLRC1Q6VVB1 395 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 REC114Q7Z4M0 266 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 ADCK2Q7Z695 626 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 LDLRAD3Q86YD5 345 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 TMIEQ8NEW7 156 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 GPR156Q8NFN8 814 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 OR6T1Q8NGN1 323 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 OSTF1Q92882 214 aa5.03□□□□□ -1.6
LINC01541-202ENST00000568095 ARHGDIGQ99819 225 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms