RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 CLOCKO15516 846 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 TMCC2O75069 709 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 SNNO75324 88 aaPredicted RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 CNOT4O95628 575 aaKnown RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 GSNP06396 782 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 PGRP06401 933 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 CD3EP07766 207 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 COX5AP20674 150 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 IGHV1-2P23083 117 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 COX20Q5RI15 118 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 GALNT5Q7Z7M9 940 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 CROCCP2Q86T23 111 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 MTDHQ86UE4 582 aaKnown RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 ARFGAP2Q8N6H7 521 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 TRNT1Q96Q11 434 aaKnown RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 OR52E6Q96RD3 313 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 USB1Q9BQ65 265 aaKnown RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 OR11A1Q9GZK7 315 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 ESRP2Q9H6T0 727 aaKnown RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 NGBQ9NPG2 151 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 THAP1Q9NVV9 213 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 LAMP3Q9UQV4 416 aa16.2■□□□□ 0.18
USB1-213ENST00000566292 SPIN1Q9Y657 262 aaPredicted RBP16.2■□□□□ 0.18
USB1-213ENST00000566292 DPRXA6NFQ7 191 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 AGAP5A6NIR3 686 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 ZNF716A6NP11 495 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 HDAC3O15379 428 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 PMS2P2O95744 297 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 KITP10721 976 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 NTF4P34130 210 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 IDH2P48735 452 aaKnown RBP16.19■□□□□ 0.18
USB1-213ENST00000566292 ATP5J2P56134 94 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 HPCAP84074 193 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 BSPH1Q075Z2 132 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 PDK3Q15120 406 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 STK11Q15831 433 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 LRRC74BQ6ZQY2 392 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 ZNF621Q6ZSS3 439 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 ZNF100Q8IYN0 542 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 TRIML2Q8N7C3 387 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 PNPT1Q8TCS8 783 aaKnown RBP16.19■□□□□ 0.18
USB1-213ENST00000566292 MGARPQ8TDB4 240 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 FBXW5Q969U6 566 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 SLC6A13Q9NSD5 602 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 LIPT1Q9Y234 373 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 HDGFL3Q9Y3E1 203 aa16.19■□□□□ 0.18
USB1-213ENST00000566292 ABCA2Q9BZC7 2435 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 PLCE1Q9P212 2302 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 OVOL3O00110 214 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 RAMP1O60894 148 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 SOD3P08294 240 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 DANCRP0C864 163 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 CCNA2P20248 432 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 RPS4Y1P22090 263 aaKnown RBP16.18■□□□□ 0.18
USB1-213ENST00000566292 RPS4XP62701 263 aaKnown RBP16.18■□□□□ 0.18
USB1-213ENST00000566292 PPA1Q15181 289 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 MAPK11Q15759 364 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 ZNF672Q499Z4 452 aaPredicted RBP16.18■□□□□ 0.18
USB1-213ENST00000566292 CCDC103Q8IW40 242 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 ZNF433Q8N7K0 673 aaPredicted RBP16.18■□□□□ 0.18
USB1-213ENST00000566292 KBTBD8Q8NFY9 601 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 NPAP1Q9NZP6 1156 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 EMC3Q9P0I2 261 aa16.18■□□□□ 0.18
USB1-213ENST00000566292 TMED7-TICAM2A0A0A6YYA0 188 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 TMEM72A0PK05 275 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 TRPC5OSA6NMA1 111 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 PGM3O95394 542 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 IGHV3-9P01782 118 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 CLK1P49759 484 aaKnown RBP16.17■□□□□ 0.18
USB1-213ENST00000566292 TXNL4AP83876 142 aaKnown RBP16.17■□□□□ 0.18
USB1-213ENST00000566292 CMIPQ8IY22 773 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 PIGXQ8TBF5 258 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 WDR60Q8WVS4 1066 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 ZHX1-C8orf76Q96EF9 292 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 MAELQ96JY0 434 aaKnown RBP16.17■□□□□ 0.18
USB1-213ENST00000566292 TRIM2Q9C040 744 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 OSGIN1Q9UJX0 560 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 NOSIPQ9Y314 301 aaKnown RBP16.17■□□□□ 0.18
USB1-213ENST00000566292 TMED7Q9Y3B3 224 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 HIVEP2P31629 2446 aa16.17■□□□□ 0.18
USB1-213ENST00000566292 CR1P17927 2039 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 DNPH1O43598 174 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 IMPDH2P12268 514 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 GGT1P19440 569 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 FKBP2P26885 142 aaKnown RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 HTR3AP46098 478 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 ANXA11P50995 505 aaKnown RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 MVDP53602 400 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 SLC16A1P53985 500 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 OR2B6P58173 313 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 H3F3AP84243 136 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 LRRC74AQ0VAA2 488 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 SLC9B1Q4ZJI4 515 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 PDCD4Q53EL6 469 aaKnown RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 TIMM23BQ5SRD1 257 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 MRPL2Q5T653 305 aaKnown RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 FBXW9Q5XUX1 488 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 NXNQ6DKJ4 435 aa16.16■□□□□ 0.18
USB1-213ENST00000566292 DNAJC14Q6Y2X3 702 aaPredicted RBP16.16■□□□□ 0.18
USB1-213ENST00000566292 MAVSQ7Z434 540 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms