RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 POMPQ9Y244 141 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 MEMO1Q9Y316 297 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 DCHS2Q6V1P9 2916 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 PRKD3O94806 890 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 ATP6V1B2P21281 511 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 IFNA8P32881 189 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 CRYZQ08257 329 aaKnown RBP23.38■■□□□ 1.33
NME3-208ENST00000565379 WLSQ5T9L3 541 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 ULK3Q6PHR2 472 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 CYP2R1Q6VVX0 501 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 VTCN1Q7Z7D3 282 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 ZNF808Q8N4W9 903 aaPredicted RBP23.38■■□□□ 1.33
NME3-208ENST00000565379 SLC25A43Q8WUT9 341 aaPredicted RBP23.38■■□□□ 1.33
NME3-208ENST00000565379 UGT2B28Q9BY64 529 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 SPRR3Q9UBC9 169 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 ACAD8Q9UKU7 415 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 ZNF337Q9Y3M9 751 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 HEATR5AQ86XA9 2040 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 CSMD1Q96PZ7 3565 aa23.38■■□□□ 1.33
NME3-208ENST00000565379 CIB2O75838 187 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 CPN1P15169 458 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 POU3F2P20265 443 aaPredicted RBP23.37■■□□□ 1.33
NME3-208ENST00000565379 TCEA1P23193 301 aaKnown RBP23.37■■□□□ 1.33
NME3-208ENST00000565379 HTR2AP28223 471 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 HOXC5Q00444 222 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 FLOT2Q14254 428 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 SF3B4Q15427 424 aaKnown RBP eCLIP23.37■■□□□ 1.332e-10■■■■■ 29.7
NME3-208ENST00000565379 OR1Q1Q15612 314 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 NPTX1Q15818 432 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 C3orf33Q6P1S2 294 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 LACC1Q8IV20 430 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 TIMP4Q99727 224 aa23.37■■□□□ 1.33
NME3-208ENST00000565379 NCKAP5O14513 1909 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 TPST2O60704 377 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 PNMTP11086 282 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 UMPSP11172 480 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 ITGA2P17301 1181 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 TACR3P29371 465 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 CLK1P49759 484 aaKnown RBP23.36■■□□□ 1.33
NME3-208ENST00000565379 ENTPD8Q5MY95 495 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 CD163Q86VB7 1156 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 OR4D11Q8NGI4 311 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 OR5M1Q8NGP8 315 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 C3orf49Q96BT1 292 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 ZNF524Q96C55 264 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 SLC47A1Q96FL8 570 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 RAB3IPQ96QF0 476 aaPredicted RBP23.36■■□□□ 1.33
NME3-208ENST00000565379 WFDC6Q9BQY6 131 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 PRDM14Q9GZV8 571 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 MAGIXQ9H6Y5 334 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 CHRNA9Q9UGM1 479 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 OSGIN1Q9UJX0 560 aa23.36■■□□□ 1.33
NME3-208ENST00000565379 KLF2Q9Y5W3 355 aaPredicted RBP23.36■■□□□ 1.33
NME3-208ENST00000565379 PCNX3Q9H6A9 2034 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 A0A0B4J2E0 115 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 A0A1B0GWA3 101 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 A0A1B0GX12 115 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 TCRBV5S2A0A599 114 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 NPIPA2E9PIF3 369 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 NPIPA3F8WFD2 350 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 H3BML4 177 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 C19orf84I3L1E1 186 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 PRRG2O14669 202 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 ZNF208O43345 1280 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 THRBP10828 461 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 ZNF708P17019 499 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 CXCR1P25024 350 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 OR1E2P47887 323 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 LHX2P50458 406 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 RPTNQ6XPR3 784 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 DEF8Q6ZN54 512 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 CYP4Z1Q86W10 505 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 MEIOBQ8N635 442 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 OR10Q1Q8NGQ4 319 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 FAM57AQ8TBR7 257 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 PHF10Q8WUB8 498 aaKnown RBP23.35■■□□□ 1.33
NME3-208ENST00000565379 CTPS2Q9NRF8 586 aa23.35■■□□□ 1.33
NME3-208ENST00000565379 TMED7-TICAM2A0A0A6YYA0 188 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 TRAPPC13A5PLN9 417 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 SHISA8B8ZZ34 492 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 OR5F1O95221 314 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 HOXD4P09016 255 aaPredicted RBP23.34■■□□□ 1.33
NME3-208ENST00000565379 TNFRSF1BP20333 461 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 PTGER4P35408 488 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 FAM98BQ52LJ0 330 aaKnown RBP23.34■■□□□ 1.33
NME3-208ENST00000565379 ALG10BQ5I7T1 473 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 PDSS1Q5T2R2 415 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 MTFR2Q6P444 385 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 ATG4DQ86TL0 474 aaPredicted RBP23.34■■□□□ 1.33
NME3-208ENST00000565379 ADGRG3Q86Y34 549 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 RBM45Q8IUH3 476 aaKnown RBP23.34■■□□□ 1.33
NME3-208ENST00000565379 MCEMP1Q8IX19 187 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 LILRA2Q8N149 483 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 RPRMLQ8N4K4 120 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 MARVELD2Q8N4S9 558 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 PRRC1Q96M27 445 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 DMRTA2Q96SC8 542 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 NPAS1Q99742 590 aa23.34■■□□□ 1.33
NME3-208ENST00000565379 PAQR5Q9NXK6 330 aaPredicted RBP23.34■■□□□ 1.33
NME3-208ENST00000565379 TMED7Q9Y3B3 224 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms