RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	TESC	Q96BS2	214 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	ROPN1L	Q96C74	230 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	ARL5B	Q96KC2	179 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC35G5	Q96KT7	338 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	C20orf27	Q9GZN8	174 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	EXOSC3	Q9NQT5	275 aa	Known RBP	12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	CTPS2	Q9NRF8	586 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	EMC3	Q9P0I2	261 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	CHRNA9	Q9UGM1	479 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754	SLC25A15	Q9Y619	301 aa		12.02	□□□□□ -0.49
RNF31-223	ENST00000560754		A0A096LNT2	108 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	RNF103-CHMP3	A0A140T963	221 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754		E7EQL1	145 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	PDLIM1	O00151	329 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	TP53	P04637	393 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	PTAFR	P25105	342 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	SOAT1	P35610	550 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	CASP9	P55211	416 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	PLAUR	Q03405	335 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	FUT5	Q11128	374 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	GABRA6	Q16445	453 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	C1QTNF12	Q5T7M4	302 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	ATAD3B	Q5T9A4	648 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	ANXA8L1	Q5VT79	327 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	SAXO2	Q658L1	398 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	OR7E24	Q6IFN5	339 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	TMEM108	Q6UXF1	575 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	FRRS1	Q6ZNA5	592 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	GRINA	Q7Z429	371 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	CCDC103	Q8IW40	242 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	LRRC34	Q8IZ02	419 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	VPS37A	Q8NEZ2	397 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	RAB8B	Q92930	207 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	NEURL3	Q96EH8	262 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	DHRS9	Q9BPW9	319 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	RHNO1	Q9BSD3	238 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	ALG2	Q9H553	416 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	ASB6	Q9NWX5	421 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	MALT1	Q9UDY8	824 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	PRDM4	Q9UKN5	801 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	NOSIP	Q9Y314	301 aa	Known RBP	12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	WDR45	Q9Y484	360 aa		12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	SPIN1	Q9Y657	262 aa	Predicted RBP	12.01	□□□□□ -0.49
RNF31-223	ENST00000560754	ELOA3D	A6NLF2	546 aa	Predicted RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	BIRC5	O15392	142 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	SSX4	O60224	188 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	MRPL33	O75394	65 aa	Known RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	SNUPN	O95149	360 aa	Known RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	MYZAP	P0CAP1	466 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	TFPI	P10646	304 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	CD40	P25942	277 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	RPL14	P50914	215 aa	Known RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	MAP2K6	P52564	334 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	IRX1	P78414	480 aa	Predicted RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	IFFO1	Q0D2I5	559 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ELOA3B	Q3SY89	546 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	EMB	Q6PCB8	327 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ZNF781	Q8N8C0	355 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	WDR31	Q8NA23	367 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ELOA3	Q8NG57	546 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	OR4A15	Q8NGL6	344 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ZNF563	Q8TA94	476 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	PIGX	Q8TBF5	258 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	PMM1	Q92871	262 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	APH1A	Q96BI3	265 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ZHX1-C8orf76	Q96EF9	292 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	HS6ST2	Q96MM7	605 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	DPY30	Q9C005	99 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	AMBRA1	Q9C0C7	1298 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	12	□□□□□ -0.49
RNF31-223	ENST00000560754	CBLN4	Q9NTU7	201 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	PARPBP	Q9NWS1	579 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	TAS2R16	Q9NYV7	291 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	TMEM181	Q9P2C4	612 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	HAO1	Q9UJM8	370 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	MALRD1	Q5VYJ5	2156 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	NBEAL1	Q6ZS30	2694 aa		12	□□□□□ -0.49
RNF31-223	ENST00000560754	CUBN	O60494	3623 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CIB4	A0PJX0	185 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	HMGN4	O00479	90 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	FAAH	O00519	579 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ZNF208	O43345	1280 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	GPRIN2	O60269	458 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	RAD51D	O75771	328 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CPSF4	O95639	269 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	IGHV3-9	P01782	118 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	SERPINE1	P05121	402 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	PTN	P21246	168 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	RYK	P34925	604 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	MAGEA8	P43361	318 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	HTR3A	P46098	478 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	IDH2	P48735	452 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CDH11	P55287	796 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	FOXG1	P55316	489 aa	Predicted RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	DSCR9	P59020	149 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	ABCE1	P61221	599 aa	Known RBP	11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	VSNL1	P62760	191 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	CHRNE	Q04844	493 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	HMBOX1	Q6NT76	420 aa		11.99	□□□□□ -0.49
RNF31-223	ENST00000560754	PODNL1	Q6PEZ8	512 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms