RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ANKRD65E5RJM6 399 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 H3BNX3 289 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 ADAMDEC1O15204 470 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 TRAPPC6AO75865 159 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 STAMBPO95630 424 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 NUDT14O95848 222 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 PNMTP11086 282 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 ITGA2P17301 1181 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 MERTKQ12866 999 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 ALG10BQ5I7T1 473 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 EMC4Q5J8M3 183 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 RAET1LQ5VY80 246 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 C3orf33Q6P1S2 294 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 ARHGAP11AQ6P4F7 1023 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 Q6ZPB1 254 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 SPATA24Q86W54 205 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 OR5M1Q8NGP8 315 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 CPT1CQ8TCG5 803 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC41A3Q96GZ6 507 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 ZNF347Q96SE7 839 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 TMEM43Q9BTV4 400 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 CHID1Q9BWS9 393 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 TSPAN10Q9H1Z9 355 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 NMNAT1Q9HAN9 279 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 CHRNA9Q9UGM1 479 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 RPH3AQ9Y2J0 694 aaPredicted RBP13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 SLC6A5Q9Y345 797 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
SNRPA1-207ENST00000559309 KIAA1549Q9HCM3 1950 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 TTLL8A6PVC2 850 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 FAM47E-STBD1D6RA91 191 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 FTCDNL1E5RQL4 147 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 FKBP6O75344 327 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 PEPDP12955 493 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 SHC1P29353 583 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 RBM34P42696 430 aaKnown RBP13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 MLLT10P55197 1068 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 ST3GAL3Q11203 375 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 AAGABQ6PD74 315 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 NKAIN4Q8IVV8 208 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 CADM2Q8N3J6 435 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 OR4C15Q8NGM1 316 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 OR6S1Q8NH40 331 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 STK35Q8TDR2 534 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 SLC25A43Q8WUT9 341 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 ABTB1Q969K4 478 aaPredicted RBP13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 MIB2Q96AX9 1013 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 SFXN2Q96NB2 322 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 UCN2Q96RP3 112 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 POTEKPQ9BYX7 375 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 SLC19A3Q9BZV2 496 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 COQ10BQ9H8M1 238 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 V9GYQ6 96 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 MPDZO75970 2070 aa13.33□□□□□ -0.28
SNRPA1-207ENST00000559309 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 ZC3H12DA2A288 527 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 ENTPD5O75356 428 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 DIRAS1O95057 198 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 SUCLG1P53597 346 aaKnown RBP13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 CLDN20P56880 219 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 HSF1Q00613 529 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 GK3PQ14409 553 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 C5orf46Q6UWT4 87 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 SLC7A13Q8TCU3 470 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 LIPHQ8WWY8 451 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 NTN4Q9HB63 628 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 MEPEQ9NQ76 525 aaPredicted RBP13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 VNN3Q9NY84 501 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 SLC7A7Q9UM01 511 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 LYVE1Q9Y5Y7 322 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 POLEQ07864 2286 aa13.32□□□□□ -0.28
SNRPA1-207ENST00000559309 GTF3C1Q12789 2109 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 FLNCQ14315 2725 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 A0A087WUU8 490 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 A0A0J9YW62 118 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 A8MVM7 634 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 TSPAN19P0C672 248 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 YAP1P46937 504 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 STARP49675 285 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 TAS2R41P59536 307 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 TOMM20Q15388 145 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 SYT14P1Q58G82 188 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 OR2T5Q6IEZ7 315 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 ESPNLQ6ZVH7 1005 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 LILRA2Q8N149 483 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 OR2T29Q8NH02 315 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 SARAFQ96BY9 339 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 ARL5BQ96KC2 179 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 KLHL15Q96M94 604 aa13.31□□□□□ -0.28
SNRPA1-207ENST00000559309 HS6ST2Q96MM7 605 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms