RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 GP1BBP13224 206 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 PCYT1AP49585 367 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 NR1H2P55055 460 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC35A2P78381 396 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 FHL1Q13642 323 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 NEDD8Q15843 81 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 OPN5Q6U736 354 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 KCTD8Q6ZWB6 473 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 CACTIN-AS1Q8N1I8 211 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 TMEM156Q8N614 296 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 HHATLQ9HCP6 504 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 TUBA8Q9NY65 449 aaPredicted RBP18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 GPR83Q9NYM4 423 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 PPP4R1LQ9P1A2 415 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 VDAC3Q9Y277 283 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 WIF1Q9Y5W5 379 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 GABARAPL2P60520 117 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 SMARCD3Q6STE5 483 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 DTX1Q86Y01 620 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 SPARTQ8N0X7 666 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 OR8J1Q8NGP2 316 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 ADAMTS17Q8TE56 1095 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 ADAMTS14Q8WXS8 1223 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 NACC2Q96BF6 587 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 KTI12Q96EK9 354 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 SGTBQ96EQ0 304 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 B3GNT4Q9C0J1 378 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 UBQLN3Q9H347 655 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 DUSP21Q9H596 190 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 GPN2Q9H9Y4 310 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 TAS2R10Q9NYW0 307 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 TPRKBQ9Y3C4 175 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 G3V3Y1 287 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC2A10O95528 541 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 SERPINA7P05543 415 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 CCL3P10147 92 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 TCEA1P23193 301 aaKnown RBP18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 CXCR1P25024 350 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 DBPQ10586 325 aaPredicted RBP18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 ATP1A1-AS1Q5TC04 95 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 OR2T33Q8NG76 320 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 MOGAT1Q96PD6 335 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 MCCC2Q9HCC0 563 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 PCNX3Q9H6A9 2034 aa18.55■□□□□ 0.56
SNRPA1-205ENST00000558036 LAMA5O15230 3695 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 ZC3H12DA2A288 527 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 SHISA8B8ZZ34 492 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 TP53I11O14683 189 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 MPZL2O60487 215 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 PTP4A3O75365 173 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 SNRPGP62308 76 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 NHLH1Q02575 133 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 MVKQ03426 396 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 PGGHGQ32M88 737 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 C1QL3Q5VWW1 255 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC46A3Q7Z3Q1 461 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 RAB43Q86YS6 212 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 C10orf53Q8N6V4 93 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 CLDN22Q8N7P3 220 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 THOC3Q96J01 351 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 LRR1Q96L50 414 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 POLDIP3Q9BY77 421 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 CLN6Q9NWW5 311 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 AKAP13Q12802 2813 aa18.54■□□□□ 0.56
SNRPA1-205ENST00000558036 F10P00742 488 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 BMP7P18075 431 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 EFNB1P98172 346 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 SRSF6Q13247 344 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC35F1Q5T1Q4 408 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 TMPRSS7Q7RTY8 843 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 MDGA2Q7Z553 956 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 VASH2Q86V25 355 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 GALNT15Q8N3T1 639 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 OR52L1Q8NGH7 329 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 PSMF1Q92530 271 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 GGHQ92820 318 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 TMEM43Q9BTV4 400 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 FBXL2Q9UKC9 423 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 ANKUB1A6NFN9 424 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 HCN1O60741 890 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 RCBTB2O95199 551 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 RPS5P46782 204 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC9A3P48764 834 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 CHAF1BQ13112 559 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 ZBED5Q49AG3 693 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 ACER2Q5QJU3 275 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 IGFN1Q86VF2 1251 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 ARMC10Q8N2F6 343 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 TRUB1Q8WWH5 349 aaKnown RBP18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 IFT27Q9BW83 186 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC19A3Q9BZV2 496 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 HPF1Q9NWY4 346 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 PSORS1C1Q9UIG5 152 aa18.53■□□□□ 0.56
SNRPA1-205ENST00000558036 TMED7-TICAM2A0A0A6YYA0 188 aa18.52■□□□□ 0.56
SNRPA1-205ENST00000558036 BHLHE40O14503 412 aa18.52■□□□□ 0.56
SNRPA1-205ENST00000558036 SURF4O15260 269 aa18.52■□□□□ 0.56
SNRPA1-205ENST00000558036 LIFP15018 202 aa18.52■□□□□ 0.56
SNRPA1-205ENST00000558036 PRKCAP17252 672 aa18.52■□□□□ 0.56
SNRPA1-205ENST00000558036 C21orf33P30042 268 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms