RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 POLE3Q9NRF9 147 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 MALT1Q9UDY8 824 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 CHRNA9Q9UGM1 479 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 PCDHGB4Q9UN71 923 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 SLC25A15Q9Y619 301 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 KCNE3Q9Y6H6 103 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 PMF1-BGLAPU3KQ54 211 aa14.93□□□□□ -0.02
XRCC3-215ENST00000555964 A0A096LNT2 108 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 RNF103-CHMP3A0A140T963 221 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 E7EQL1 145 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 SHBGP04278 402 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 GUSBP08236 651 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 THBS2P35442 1172 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 MAGEA8P43361 318 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 SLC16A1P53985 500 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 HBA1P69905 142 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 TGFBR3Q03167 851 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 C6orf136Q5SQH8 315 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 IL23RQ5VWK5 629 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 GRINAQ7Z429 371 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 C17orf78Q8N4C9 275 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 C1orf162Q8NEQ5 155 aaPredicted RBP14.92□□□□□ -0.02
XRCC3-215ENST00000555964 ZNF350Q9GZX5 532 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 SHARPINQ9H0F6 387 aa14.92□□□□□ -0.02
XRCC3-215ENST00000555964 M0R1B8 84 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 KIAA0513O60268 411 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 GPRIN2O60269 458 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 UGT2B17O75795 530 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 SLU7O95391 586 aaKnown RBP14.91□□□□□ -0.02
XRCC3-215ENST00000555964 IGHV3-9P01782 118 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 EDNRAP25101 427 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 ALDH3A1P30838 453 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 EFNA4P52798 201 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 RPS26P62854 115 aaKnown RBP14.91□□□□□ -0.02
XRCC3-215ENST00000555964 HPCAP84074 193 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 C6orf120Q7Z4R8 191 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 KRTCAP2Q8N6L1 136 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 AGR3Q8TD06 166 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 EPS8L3Q8TE67 593 aaKnown RBP14.91□□□□□ -0.02
XRCC3-215ENST00000555964 TUBGCP3Q96CW5 907 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 PARPBPQ9NWS1 579 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 UPB1Q9UBR1 384 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 MKLN1Q9UL63 735 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 SLC9A8Q9Y2E8 581 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 AMDHD2Q9Y303 409 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 FKBP7Q9Y680 259 aa14.91□□□□□ -0.02
XRCC3-215ENST00000555964 ZNF716A6NP11 495 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 RNASET2O00584 256 aaKnown RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 EIF1BO60739 113 aaKnown RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 PTNP21246 168 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 USF1P22415 310 aaPredicted RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 HTR3AP46098 478 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 GZMKP49863 264 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 KLHL24Q6TFL4 600 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 RIMKLAQ8IXN7 391 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 RIBC1Q8N443 379 aaPredicted RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 ZNF525Q8N782 197 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 FAM71CQ8NEG0 241 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 MIPOL1Q8TD10 442 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 ZNF524Q96C55 264 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 MUS81Q96NY9 551 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 ZIM3Q96PE6 472 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 CCDC106Q9BWC9 280 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 EXOSC3Q9NQT5 275 aaKnown RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 NOP53Q9NZM5 478 aaKnown RBP14.9□□□□□ -0.02
XRCC3-215ENST00000555964 GIMAP2Q9UG22 337 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 DCTN4Q9UJW0 460 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 TRAPPC4Q9Y296 219 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 WDR45Q9Y484 360 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 ATP23Q9Y6H3 246 aa14.9□□□□□ -0.02
XRCC3-215ENST00000555964 CUBNO60494 3623 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 SKAP2O75563 359 aaPredicted RBP14.89□□□□□ -0.03
XRCC3-215ENST00000555964 PAX7P23759 505 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 PGM1P36871 562 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 SLC35A1P78382 337 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 SPOCK1Q08629 439 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 GABRA6Q16445 453 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 SMU1Q2TAY7 513 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 PGS1Q32NB8 556 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 CASP12Q6UXS9 341 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 GSPT2Q8IYD1 628 aaKnown RBP14.89□□□□□ -0.03
XRCC3-215ENST00000555964 ARFGAP2Q8N6H7 521 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 VPS37AQ8NEZ2 397 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 C10orf105Q8TEF2 133 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 NAA11Q9BSU3 229 aaPredicted RBP14.89□□□□□ -0.03
XRCC3-215ENST00000555964 MANSC1Q9H8J5 431 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 TMEM181Q9P2C4 612 aa14.89□□□□□ -0.03
XRCC3-215ENST00000555964 NDUFS8O00217 210 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 FCMRO60667 390 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 WNT11O96014 354 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 UQCRBP14927 111 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 SRD5A1P18405 259 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 HNF1AP20823 631 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 APOBEC3AP31941 199 aaPredicted RBP14.88□□□□□ -0.03
XRCC3-215ENST00000555964 KHKP50053 298 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 PDLIM4P50479 330 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 MAP2K6P52564 334 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 CLDN8P56748 225 aa14.88□□□□□ -0.03
XRCC3-215ENST00000555964 OR2B6P58173 313 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms