RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 AP3D1O14617 1153 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 GPR75O95800 540 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 IGHEP01854 428 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 FPR3P25089 353 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CXADRP78310 365 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CHRNEQ04844 493 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 FOXD4Q12950 439 aaPredicted RBP15.94■□□□□ 0.14
SHOX-204ENST00000554971 ST3GAL2Q16842 350 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 STEAP3Q658P3 488 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CPEB2Q7Z5Q1 589 aaKnown RBP15.94■□□□□ 0.14
SHOX-204ENST00000554971 RAB43Q86YS6 212 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 PHC2Q8IXK0 858 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CLDN22Q8N7P3 220 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 OR4K14Q8NGD5 310 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 OR52I1Q8NGK6 324 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 OR9A2Q8NGT5 310 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 METTL21AQ8WXB1 218 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CEP19Q96LK0 163 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 WDFY2Q96P53 400 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 SLC30A2Q9BRI3 323 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 YIPF4Q9BSR8 244 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 ZNF229Q9UJW7 825 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 FBXL4Q9UKA2 621 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 TPST2O60704 377 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 SOX30O94993 753 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 IL1AP01583 271 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 RUNX1T1Q06455 604 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 Q0VFX4 171 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 STX4Q12846 297 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 EIPR1Q53HC9 387 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 ACSM5Q6NUN0 579 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 MFSD12Q6NUT3 480 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 ZNF730Q6ZMV8 503 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 OR2L13Q8N349 312 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 OR52P1PQ8NH57 321 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 SETD6Q8TBK2 473 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 MED18Q9BUE0 208 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 SAP130Q9H0E3 1048 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 ZNF700Q9H0M5 742 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 CLEC2DQ9UHP7 191 aa15.94■□□□□ 0.14
SHOX-204ENST00000554971 PAIP2BQ9ULR5 123 aaKnown RBP15.94■□□□□ 0.14
SHOX-204ENST00000554971 IQCMA0A1B0GVH7 501 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 KDM4EB2RXH2 506 aaPredicted RBP15.93■□□□□ 0.14
SHOX-204ENST00000554971 TBX1O43435 398 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 APOA1P02647 267 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 THBS1P07996 1170 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 GAAP10253 952 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 PTGER1P34995 402 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 SOX18P35713 384 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 CHAF1BQ13112 559 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 TPBGQ13641 420 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 LARS2Q15031 903 aaKnown RBP15.93■□□□□ 0.14
SHOX-204ENST00000554971 ARHGAP11BQ3KRB8 267 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 SOWAHCQ53LP3 525 aaPredicted RBP15.93■□□□□ 0.14
SHOX-204ENST00000554971 DCAF10Q5QP82 559 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 ZCCHC12Q6PEW1 402 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 PEX5LQ8IYB4 626 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 POC5Q8NA72 575 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 ZSCAN1Q8NBB4 408 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 PTPMT1Q8WUK0 201 aaPredicted RBP15.93■□□□□ 0.14
SHOX-204ENST00000554971 CHAC2Q8WUX2 184 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 THAP4Q8WY91 577 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 SLC35A4Q96G79 324 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 IMMP1LQ96LU5 166 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 COQ7Q99807 217 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 CNPPD1Q9BV87 410 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 RNF167Q9H6Y7 350 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 POLHQ9Y253 713 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 KCNE3Q9Y6H6 103 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 NINQ8N4C6 2090 aa15.93■□□□□ 0.14
SHOX-204ENST00000554971 A8MUA0 341 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 HMGN1P05114 100 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 CELA2AP08217 269 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 OMPP47874 163 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 WNT4P56705 351 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 CBX3Q13185 183 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 DEFB109BQ30KR1 87 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 GPA33Q99795 319 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 PRORYQ9H606 182 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 EXOSC4Q9NPD3 245 aaKnown RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 IL20Q9NYY1 176 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 KCNMB2Q9Y691 235 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 TNRC6AQ8NDV7 1962 aaKnown RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 HRKO00198 91 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 CPMP14384 443 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 GAS1P54826 345 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 DUSP8Q13202 625 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 PAPD4Q6PIY7 484 aaKnown RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 NDUFAF7Q7L592 441 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 KIF18BQ86Y91 864 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 SNX29P2Q8IUI4 249 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 IQCF1Q8N6M8 205 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 NFAM1Q8NET5 270 aaPredicted RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 DOK4Q8TEW6 326 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 IP6K3Q96PC2 410 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 SMURF1Q9HCE7 757 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 ZNF160Q9HCG1 818 aa15.92■□□□□ 0.14
SHOX-204ENST00000554971 PNO1Q9NRX1 252 aaKnown RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 C19orf25Q9UFG5 118 aaPredicted RBP15.92■□□□□ 0.14
SHOX-204ENST00000554971 ITGB1BP2Q9UKP3 347 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms