RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 DNAJB13P59910 316 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 NAA20P61599 178 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SNRPD2P62316 118 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 ETF1P62495 437 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 GPR68Q15743 365 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 C12orf54Q6X4T0 127 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SLC46A3Q7Z3Q1 461 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 R3HCC1LQ7Z5L2 792 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 C17orf78Q8N4C9 275 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 NOA1Q8NC60 698 aaKnown RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 PSMA8Q8TAA3 256 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 PIGXQ8TBF5 258 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 TMEM234Q8WY98 164 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 ZHX1-C8orf76Q96EF9 292 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SDF2Q99470 211 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 VRK1Q99986 396 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-209ENST00000553308 CCDC106Q9BWC9 280 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 NMUR2Q9GZQ4 415 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SERHL2Q9H4I8 314 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 CTPS2Q9NRF8 586 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 SLC7A10Q9NS82 523 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 ACER3Q9NUN7 267 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 GIMAP2Q9UG22 337 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 TBK1Q9UHD2 729 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 DCDC2Q9UHG0 476 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 DCTN4Q9UJW0 460 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 AMDHD2Q9Y303 409 aa7.93□□□□□ -1.14
SYNE2-209ENST00000553308 TMEM233B4DJY2 109 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 GPR171O14626 319 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 AZIN1O14977 448 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 PLIN3O60664 434 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 FCMRO60667 390 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 UGT2B17O75795 530 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 KRT16P08779 473 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 PGCP20142 388 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 SRP14P37108 136 aaKnown RBP7.92□□□□□ -1.14
SYNE2-209ENST00000553308 PTGR1Q14914 329 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF141Q15928 474 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 TSPO2Q5TGU0 170 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 KANK2Q63ZY3 851 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 RNF165Q6ZSG1 346 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 SPATA19Q7Z5L4 167 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 C1orf162Q8NEQ5 155 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-209ENST00000553308 SFXN5Q8TD22 340 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 OR5P2Q8WZ92 322 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 ADAM19Q9H013 955 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 MYOZ1Q9NP98 299 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-209ENST00000553308 OXSMQ9NWU1 459 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 PSMC3IPQ9P2W1 217 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-209ENST00000553308 UPB1Q9UBR1 384 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 CHRNA9Q9UGM1 479 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 MKLN1Q9UL63 735 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 TMED5Q9Y3A6 229 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 DNAJC15Q9Y5T4 150 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 FLVCR1Q9Y5Y0 555 aa7.92□□□□□ -1.14
SYNE2-209ENST00000553308 HEATR1Q9H583 2144 aaKnown RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 IGHV1-18A0A0C4DH31 117 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 KLF11O14901 512 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 PIP5K1BO14986 540 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 RIPK2O43353 540 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 STX11O75558 287 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 DDX5P17844 614 aaKnown RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 CDH2P19022 906 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 CCNA2P20248 432 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 RYKP34925 604 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 SOAT1P35610 550 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 PGM1P36871 562 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 SERPINF1P36955 418 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 APOBEC1P41238 236 aaKnown RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 MAGEA8P43361 318 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 OR2B6P58173 313 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 PRPS1P60891 318 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 H3F3AP84243 136 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 PLAURQ03405 335 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 ADIPOQQ15848 244 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 MAPK14Q16539 360 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 ZSWIM7Q19AV6 140 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 HIKESHIQ53FT3 197 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 KLHL24Q6TFL4 600 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 EIF3MQ7L2H7 374 aaKnown RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 HMGN2P46Q86SG4 172 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 DDIASQ8IXT1 998 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 CLEC4FQ8N1N0 589 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 KRTCAP2Q8N6L1 136 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 CCDC63Q8NA47 563 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 FAM71CQ8NEG0 241 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF563Q8TA94 476 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 TWIST2Q8WVJ9 160 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 C1orf50Q9BV19 199 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 ZNF350Q9GZX5 532 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 CA10Q9NS85 328 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 TMEFF2Q9UIK5 374 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 SLC9A8Q9Y2E8 581 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 HDGFL3Q9Y3E1 203 aa7.91□□□□□ -1.14
SYNE2-209ENST00000553308 SPIN1Q9Y657 262 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-209ENST00000553308 TMEM114B3SHH9 223 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 CFLARO15519 480 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 KCNAB3O43448 404 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 DNPH1O43598 174 aa7.9□□□□□ -1.14
SYNE2-209ENST00000553308 LILRA1O75019 489 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms