RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SLC18A1P54219 525 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 CSNK2A1P68400 391 aaPredicted RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 HHATQ5VTY9 493 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 LRRC74BQ6ZQY2 392 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 MTDHQ86UE4 582 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 PIWIL2Q8TC59 973 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 CNOT9Q92600 299 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 NEUROG1Q92886 237 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 TRNT1Q96Q11 434 aaKnown RBP11.88□□□□□ -0.51
GCN1-206ENST00000549815 PANX1Q96RD7 426 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 BDH2Q9BUT1 245 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 SLC6A13Q9NSD5 602 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 LIPT1Q9Y234 373 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 RNF115Q9Y4L5 304 aa11.88□□□□□ -0.51
GCN1-206ENST00000549815 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 FAM171A2A8MVW0 826 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 OVOL3O00110 214 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 FAAHO00519 579 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 AP3D1O14617 1153 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 DNPH1O43598 174 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 LYZL6O75951 148 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 CNOT4O95628 575 aaKnown RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 GSNP06396 782 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 SLC16A1P53985 500 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 H3F3AP84243 136 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 LRRC74AQ0VAA2 488 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 COX20Q5RI15 118 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 ALKBH2Q6NS38 261 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 DNAJC14Q6Y2X3 702 aaPredicted RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 ZNF621Q6ZSS3 439 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 MAVSQ7Z434 540 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 GALNT5Q7Z7M9 940 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 TRIML2Q8N7C3 387 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 GLB1L3Q8NCI6 653 aaPredicted RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 OR52E6Q96RD3 313 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
GCN1-206ENST00000549815 ESRP2Q9H6T0 727 aaKnown RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 SPIN1Q9Y657 262 aaPredicted RBP11.87□□□□□ -0.51
GCN1-206ENST00000549815 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 TRPC5OSA6NMA1 111 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 CLOCKO15516 846 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 RAMP1O60894 148 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 CD3EP07766 207 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 THBS1P07996 1170 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 SOD3P08294 240 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 TFPIP10646 304 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 KITP10721 976 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 IMPDH2P12268 514 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 IDH2P48735 452 aaKnown RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 RPS4XP62701 263 aaKnown RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 HPCAP84074 193 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 BSPH1Q075Z2 132 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 ZNF672Q499Z4 452 aaPredicted RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 SLC9B1Q4ZJI4 515 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 PDCD4Q53EL6 469 aaKnown RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 TIMM23BQ5SRD1 257 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 ZNF433Q8N7K0 673 aaPredicted RBP11.86□□□□□ -0.51
GCN1-206ENST00000549815 KBTBD8Q8NFY9 601 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 MGARPQ8TDB4 240 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 WDR60Q8WVS4 1066 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 PMM1Q92871 262 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 TLCD1Q96CP7 247 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 DNAJA3Q96EY1 480 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 NGBQ9NPG2 151 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 NPAP1Q9NZP6 1156 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 OSGIN1Q9UJX0 560 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 TRAPPC4Q9Y296 219 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 ABCA2Q9BZC7 2435 aa11.86□□□□□ -0.51
GCN1-206ENST00000549815 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 TMEM72A0PK05 275 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 SLCO1B7G3V0H7 640 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 SMAD7O15105 426 aaKnown RBP11.85□□□□□ -0.51
GCN1-206ENST00000549815 ZNF208O43345 1280 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 IDO1P14902 403 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 HTR3AP46098 478 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 ANXA11P50995 505 aaKnown RBP11.85□□□□□ -0.51
GCN1-206ENST00000549815 ATP5J2P56134 94 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 EPS8Q12929 822 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 PPA1Q15181 289 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 PGGHGQ32M88 737 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
GCN1-206ENST00000549815 FBXW9Q5XUX1 488 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 ATG16L1Q676U5 607 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 CCDC103Q8IW40 242 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 PIGXQ8TBF5 258 aa11.85□□□□□ -0.51
GCN1-206ENST00000549815 PNPT1Q8TCS8 783 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms