RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 TGIF2Q9GZN2 237 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 Q9N2J8 555 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 KCNE5Q9UJ90 142 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 RNF6Q9Y252 685 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 MAU2Q9Y6X3 613 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 HCFC1P51610 2035 aa18.19■□□□□ 0.5
CTDSP2-204ENST00000548823 TCRBV16S1A1N1A0A5B0 115 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 E9PLN8 166 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF701M0R085 212 aaPredicted RBP18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 WBP4O75554 376 aaKnown RBP18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 OR6B1O95007 311 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 CLPSP04118 112 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 IFNA16P05015 189 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 COX6A1P12074 109 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 CHMP24386 653 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 OR1D4P47884 311 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 CDC42P60953 191 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 SLC35A2P78381 396 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 RHAGQ02094 409 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 LTBQ06643 244 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 TUBA3CQ13748 450 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 PTGES3Q15185 160 aaKnown RBP18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF141Q15928 474 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 MAPK14Q16539 360 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 CNPY1Q3B7I2 92 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 KCTD8Q6ZWB6 473 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 GPR141Q7Z602 305 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 HMGN2P46Q86SG4 172 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 PLPP5Q8NEB5 264 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 C16orf52Q8NHV5 167 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 NRGNQ92686 78 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 ART5Q96L15 291 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 VKORC1Q9BQB6 163 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 C14orf105Q9NVL8 296 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 FBXO34Q9NWN3 711 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 COQ3Q9NZJ6 369 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 ERVK-19Q9WJR5 959 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 CEPT1Q9Y6K0 416 aa18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 INTS1Q8N201 2190 aaKnown RBP18.18■□□□□ 0.5
CTDSP2-204ENST00000548823 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 NPIPB9F8W1W9 429 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 GABRB1P18505 474 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 TNNI3P19429 210 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 DRD5P21918 477 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ELAVL1Q15717 326 aaKnown RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 MRPL2Q5T653 305 aaKnown RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 SLX4IPQ5VYV7 408 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 FIGNL1Q6PIW4 674 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 PLEKHM3Q6ZWE6 761 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CMIPQ8IY22 773 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 SPARTQ8N0X7 666 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 BPIFB6Q8NFQ5 453 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 FAM81AQ8TBF8 368 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 GNPDA2Q8TDQ7 276 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 PTPMT1Q8WUK0 201 aaPredicted RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ACOT11Q8WXI4 607 aaPredicted RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 NODALQ96S42 347 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 DMRTA2Q96SC8 542 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF559Q9BR84 538 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CNPPD1Q9BV87 410 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 TESQ9UGI8 421 aaKnown RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 SNX5Q9Y5X3 404 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 A0A087WUU8 490 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 C17orf105B2RV13 164 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 HRKO00198 91 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 HTR1AP08908 422 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ZGLP1P0C6A0 271 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CT45A8P0DMV1 189 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CT45A9P0DMV2 189 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 POU2F1P14859 743 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 OCA2Q04671 838 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 PCOLCEQ15113 449 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 FLYWCH1Q4VC44 716 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CT45A2Q5DJT8 189 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 NPSR1Q6W5P4 371 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ZER1Q7Z7L7 766 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 P3H2Q8IVL5 708 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 STT3BQ8TCJ2 826 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 APH1BQ8WW43 257 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 TRUB1Q8WWH5 349 aaKnown RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 REPIN1Q9BWE0 567 aaKnown RBP18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 YIPF2Q9BWQ6 316 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF226Q9NYT6 803 aa18.17■□□□□ 0.5
CTDSP2-204ENST00000548823 CENPVL1A0A0U1RR11 272 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 A0A1W2PQ72 361 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 SH3D21A4FU49 640 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 TRAPPC13A5PLN9 417 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 CPSF4LA6NMK7 179 aaKnown RBP18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 TP53P04637 393 aaPredicted RBP18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 LCN1P31025 176 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 FMO3P31513 532 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 PPICP45877 212 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 GSSP48637 474 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 SH3BGRP55822 239 aaPredicted RBP18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 ZNF766Q5HY98 468 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 ABHD17BQ5VST6 288 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 C12orf73Q69YU5 71 aa18.16■□□□□ 0.5
CTDSP2-204ENST00000548823 DOLPP1Q86YN1 238 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms