RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SDHDO14521 159 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 DNPH1O43598 174 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 PMS2P2O95744 297 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 THBS1P07996 1170 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 TFPIP10646 304 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 S100A3P33764 101 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 RYKP34925 604 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 CDKN1AP38936 164 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 CHRNEQ04844 493 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 TNK1Q13470 666 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 GPAT3Q53EU6 434 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 DNAJC14Q6Y2X3 702 aaPredicted RBP15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 PRIMA1Q86XR5 153 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 RNF130Q86XS8 419 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF100Q8IYN0 542 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 ANKFN1Q8N957 763 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 SMAP2Q8WU79 429 aaPredicted RBP15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 DNAJA3Q96EY1 480 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 PARD6BQ9BYG5 372 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 SLC38A1Q9H2H9 487 aa15.36■□□□□ 0.05
CHMP1A-205ENST00000548650 GOLGA8QA0A0J9YX86 632 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 A0A1W2PP18 115 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 GOLGA8OA6NCC3 632 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 OR5H1A6NKK0 313 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 SHISA9B4DS77 424 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 GOLGA8NF8WBI6 632 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 AP3D1O14617 1153 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 RAMP1O60894 148 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 PGM3O95394 542 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 IGHV3-9P01782 118 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 CHRM4P08173 479 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 GGT1P19440 569 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 IL12AP29459 219 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 CDKN2CP42773 168 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 SLC16A1P53985 500 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 NME5P56597 212 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 UFM1P61960 85 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 KCNJ10P78508 379 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 STX3Q13277 289 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 VEZF1Q14119 521 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ETFDHQ16134 617 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 TIMM23BQ5SRD1 257 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 CEP85LQ5SZL2 805 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ADGRG3Q86Y34 549 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ARFGAP2Q8N6H7 521 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ZNF433Q8N7K0 673 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 PIGXQ8TBF5 258 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 CNOT9Q92600 299 aaKnown RBP15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 APH1AQ96BI3 265 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ZBTB9Q96C00 473 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ZHX1-C8orf76Q96EF9 292 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 TRNT1Q96Q11 434 aaKnown RBP15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 INPP5KQ9BT40 448 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 MALT1Q9UDY8 824 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 LIPT1Q9Y234 373 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 HDGFL3Q9Y3E1 203 aa15.35■□□□□ 0.05
CHMP1A-205ENST00000548650 ABCA1O95477 2261 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 CHD3Q12873 2000 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 AGAP5A6NIR3 686 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 RAD51DO75771 328 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 RPS4Y1P22090 263 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 NTF4P34130 210 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 CDH11P55287 796 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 SYPL1Q16563 259 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 CLEC12BQ2HXU8 276 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 FBXW9Q5XUX1 488 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 SSX8Q7RTT4 187 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 P2RY8Q86VZ1 359 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 CMIPQ8IY22 773 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 GTPBP3Q969Y2 492 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 PANX1Q96RD7 426 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 TRAF4Q9BUZ4 470 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 KCNK9Q9NPC2 374 aa15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 NOSIPQ9Y314 301 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-205ENST00000548650 CCDC154A6NI56 674 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 ABCD4O14678 606 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 IGHV4-39P01824 125 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 PGRP06401 933 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 IDH2P48735 452 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 CLK1P49759 484 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 TXNL4AP83876 142 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 FAPQ12884 760 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 DTX2Q86UW9 622 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 TRIML2Q8N7C3 387 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 WDR60Q8WVS4 1066 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 MUCL1Q96DR8 90 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 TRMT61AQ96FX7 289 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 SLCO5A1Q9H2Y9 848 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 RAB21Q9UL25 225 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 GPR45Q9Y5Y3 372 aa15.33■□□□□ 0.04
CHMP1A-205ENST00000548650 ANK3Q12955 4377 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 TMEM72A0PK05 275 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 RNF223E7ERA6 249 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 FAAHO00519 579 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 GPR171O14626 319 aa15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 SNNO75324 88 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-205ENST00000548650 CD8AP01732 235 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms