RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 ZNF879B4DU55 563 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 ST8SIA6P61647 398 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 SREBF2Q12772 1141 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 LTB4RQ15722 352 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 CEBPEQ15744 281 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 FAM199XQ6PEV8 388 aaPredicted RBP21.36■■□□□ 1.01
NPAS3-206ENST00000548645 NUDT18Q6ZVK8 323 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 TMPRSS11FQ6ZWK6 438 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 LRRTM4Q86VH4 590 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 NAXDQ8IW45 347 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 BVESQ8NE79 360 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 OR10Z1Q8NGY1 313 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 THEM6Q8WUY1 208 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 SIGLEC7Q9Y286 467 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 POM121CA8CG34 1229 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 SULT1B1O43704 296 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 CERS1P27544 350 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 EEF1A1P68104 462 aaKnown RBP21.36■■□□□ 1.01
NPAS3-206ENST00000548645 ZMYND11Q15326 602 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 MFSD12Q6NUT3 480 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 HSD17B13Q7Z5P4 300 aaPredicted RBP21.36■■□□□ 1.01
NPAS3-206ENST00000548645 OR2L5Q8NG80 312 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 BPIFA2Q96DR5 249 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 IFT46Q9NQC8 304 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 FBXL4Q9UKA2 621 aa21.36■■□□□ 1.01
NPAS3-206ENST00000548645 MDC1Q14676 2089 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TBC1D3KA0A087X1G2 549 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TBC1D3BA6NDS4 549 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TBC1D3FA6NER0 549 aaPredicted RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 LGALS8O00214 317 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 PDCD5O14737 125 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 C8AP07357 584 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 SLC35G4P0C7Q5 338 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 CCR2P41597 374 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 ACTA2P62736 377 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 ACTG2P63267 376 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 SIRPAP78324 504 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 SIM1P81133 766 aaPredicted RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TBC1D3GQ6DHY5 549 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TMUB2Q71RG4 321 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 SYS1Q8N2H4 156 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 PELI1Q96FA3 418 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 UTP23Q9BRU9 249 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TTTY10Q9BZA0 68 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 KLK11Q9UBX7 282 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 HMSDA8MTL9 139 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 AIPO00170 330 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 HIST1H2ABP04908 130 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 GYPBP06028 91 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 PPP3CBP16298 524 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 ANXA7P20073 488 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 RPS11P62280 158 aaKnown RBP eCLIP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 DUSP8Q13202 625 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 COL9A2Q14055 689 aaPredicted RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 OR1Q1Q15612 314 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 LINC00303Q3SY05 128 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 HIST3H2AQ7L7L0 130 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 LSRQ86X29 649 aaPredicted RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 LSM14AQ8ND56 463 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 HIST1H2ACQ93077 130 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 ARRDC3Q96B67 414 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 MS4A4EQ96PG1 132 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 PELOQ9BRX2 385 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 HRH3Q9Y5N1 445 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TBC1D3EA0A087X179 549 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 A0A1B0GTQ1 180 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 ANKRD20A5PA0PJZ0 165 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 NDUFA2O43678 99 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 MRPS10P82664 201 aaKnown RBP21.35■■□□□ 1.01
NPAS3-206ENST00000548645 DEFB128Q7Z7B8 93 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 OR2A1Q8NGT9 310 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 PHYHIPQ92561 330 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TM7SF3Q9NS93 570 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TAS2R10Q9NYW0 307 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 MED11Q9P086 117 aa21.35■■□□□ 1.01
NPAS3-206ENST00000548645 TRBV2A0A0J9YWF9 115 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 ARPC5O15511 151 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 THBS1P07996 1170 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 HTR2AP28223 471 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 NDUFS1P28331 727 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 VASPP50552 380 aaPredicted RBP21.34■■□□□ 1.01
NPAS3-206ENST00000548645 CAMK1Q14012 370 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 HES5Q5TA89 166 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 RPL22L1Q6P5R6 122 aaKnown RBP21.34■■□□□ 1.01
NPAS3-206ENST00000548645 NUPL2O15504 423 aaKnown RBP21.34■■□□□ 1.01
NPAS3-206ENST00000548645 MTRF1O75570 445 aaKnown RBP21.34■■□□□ 1.01
NPAS3-206ENST00000548645 GABRA1P14867 456 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 ARHGAP11BQ3KRB8 267 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 FAM111BQ6SJ93 734 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 RFLNBQ8N5W9 214 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 SLC25A38Q96DW6 304 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 FERD3LQ96RJ6 166 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 MED31Q9Y3C7 131 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 SCN5AQ14524 2016 aa21.34■■□□□ 1.01
NPAS3-206ENST00000548645 ANXA2P2A6NMY6 339 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 CD1AP06126 327 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 PROS1P07225 676 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 SRMP19623 302 aa21.33■■□□□ 1.01
NPAS3-206ENST00000548645 MAZP56270 477 aaKnown RBP21.33■■□□□ 1.01
NPAS3-206ENST00000548645 GPR68Q15743 365 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms