RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 C4orf36Q96KX1 117 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 RTN4RQ9BZR6 473 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 MKKSQ9NPJ1 570 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 TESQ9UGI8 421 aaKnown RBP11.69□□□□□ -0.54
SCAF11-209ENST00000547018 GMEB2Q9UKD1 530 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 N6AMT1Q9Y5N5 214 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 PEX16Q9Y5Y5 336 aa11.69□□□□□ -0.54
SCAF11-209ENST00000547018 IGHV1OR21-1A0A087WYE8 117 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SERINC4A6NH21 518 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 DYRK3O43781 588 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 FBLP22087 321 aaKnown RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ACAA2P42765 397 aaKnown RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ATP12AP54707 1039 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 NXPH1P58417 271 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 MLLT11Q13015 90 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 AADACL4Q5VUY2 407 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 GUSBP11Q6P575 273 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 LYSMD2Q8IV50 215 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF595Q8IYB9 648 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 CADM3Q8N126 398 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 POGLUT1Q8NBL1 392 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 CCDC74AQ96AQ1 378 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 Q96M85 177 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 TEAD3Q99594 435 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 KATNB1Q9BVA0 655 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SIGLEC7Q9Y286 467 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SLC6A5Q9Y345 797 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 DUX1O43812 170 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 CBFA2T3O75081 653 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ICOSLGO75144 302 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 UPK1BO75841 260 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 HLA-DQA2P01906 255 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 THBS1P07996 1170 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 FREM3P0C091 2139 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SHC1P29353 583 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 GPR3P46089 330 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 PRAMEF8Q5VWM4 474 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 PRAMEF7Q5VXH5 474 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 RTL4Q6ZR62 310 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 STACQ99469 402 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 RPRD1BQ9NQG5 326 aaKnown RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 GNG8Q9UK08 70 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 A0A0B4J203 849 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 HPGDSO60760 199 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 PAHP00439 452 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF3P17036 446 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 HSD11B2P80365 405 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 CCBE1Q6UXH8 406 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 TMPRSS9Q7Z410 1059 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 PTPMT1Q8WUK0 201 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF524Q96C55 264 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 MOGAT1Q96PD6 335 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 NEDD4LQ96PU5 975 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 NKX3-1Q99801 234 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 NUDT9Q9BW91 350 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 BEX2Q9BXY8 128 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 TBL1XR1Q9BZK7 514 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 TMEM185BQ9H7F4 350 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 AKIRIN1Q9H9L7 192 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF304Q9HCX3 659 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 FBXO8Q9NRD0 319 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 ASB6Q9NWX5 421 aa11.68□□□□□ -0.54
SCAF11-209ENST00000547018 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SELENOFO60613 162 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 HCN1O60741 890 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SLC2A2P11168 524 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 ARRB1P49407 418 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 RELAQ04206 551 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 BAK1Q16611 211 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 HYAL4Q2M3T9 481 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 TMEM201Q5SNT2 666 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 MEPCEQ7L2J0 689 aaKnown RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 EID2Q8N6I1 236 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 ZNF433Q8N7K0 673 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 OR8K3Q8NH51 312 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SLC2A12Q8TD20 617 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SNX33Q8WV41 574 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 ZNRF4Q8WWF5 429 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 OR6C1Q96RD1 312 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 PSD2Q9BQI7 771 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SERTAD3Q9UJW9 196 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 VDAC3Q9Y277 283 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 A0A0B4J2E0 115 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 A0A1B0GX12 115 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SHISA8B8ZZ34 492 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 MRPS14O60783 128 aaKnown RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 CPNE3O75131 537 aaKnown RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 IMPDH2P12268 514 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 POU3F3P20264 500 aaPredicted RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 APEX1P27695 318 aaKnown RBP11.67□□□□□ -0.54
SCAF11-209ENST00000547018 ARFIP1P53367 373 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 OR10A3P58181 314 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 SNTA1Q13424 505 aa11.67□□□□□ -0.54
SCAF11-209ENST00000547018 IL18Q14116 193 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms