RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZCCHC18P0CG32 403 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 PAX1P15863 534 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 IL12AP29459 219 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 IDH2P48735 452 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 PTH2RP49190 550 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 POLR2HP52434 150 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 RPS4XP62701 263 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 SLC35A1P78382 337 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 FUT5Q11128 374 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 TSC22D1Q15714 1073 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ZSWIM7Q19AV6 140 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 NCMAPQ5T1S8 102 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 MSANTD1Q6ZTZ1 278 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ADGRG3Q86Y34 549 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ANKFN1Q8N957 763 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 PIWIL2Q8TC59 973 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 WDR60Q8WVS4 1066 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 CNOT9Q92600 299 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 AKAP1Q92667 903 aaKnown RBP eCLIP8.3□□□□□ -1.08
YBX3-218ENST00000546298 APH1AQ96BI3 265 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ZBTB9Q96C00 473 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 DDIT4LQ96D03 193 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 PERPQ96FX8 193 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 MAELQ96JY0 434 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 Q96MF0 132 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ZNF300Q96RE9 604 aaPredicted RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 NAA11Q9BSU3 229 aaPredicted RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ARMC7Q9H6L4 198 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 TMBIM4Q9HC24 238 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 PARPBPQ9NWS1 579 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 TMEM181Q9P2C4 612 aa8.3□□□□□ -1.08
YBX3-218ENST00000546298 ING1Q9UK53 422 aaPredicted RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 NOSIPQ9Y314 301 aaKnown RBP8.3□□□□□ -1.08
YBX3-218ENST00000546298 TMED7-TICAM2A0A0A6YYA0 188 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 PRAMEF27A3QJZ7 478 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 C9JVG2 144 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 KLF11O14901 512 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 MRPL33O75394 65 aaKnown RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 PLAUP00749 431 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CHRM4P08173 479 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 GGT1P19440 569 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CCNA2P20248 432 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 TACR3P29371 465 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CDKN2CP42773 168 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 SLC1A3P43003 542 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CRATP43155 626 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 SLC16A1P53985 500 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CRISP3P54108 245 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ATP5J2P56134 94 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 OR2B6P58173 313 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 COPZ1P61923 177 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 LTBQ06643 244 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 LARS2Q15031 903 aaKnown RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 PPA1Q15181 289 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 SYPL1Q16563 259 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 LIN52Q52LA3 116 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 TIMM23BQ5SRD1 257 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 FBXW9Q5XUX1 488 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ABLIM2Q6H8Q1 611 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 CLEC9AQ6UXN8 241 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 UBE2J2Q8N2K1 259 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ZNF75CPQ92670 426 aaPredicted RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 FBXW5Q969U6 566 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 TLCD1Q96CP7 247 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 TRMT61AQ96FX7 289 aaKnown RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 ITCHQ96J02 903 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ARL5BQ96KC2 179 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 COX4I2Q96KJ9 171 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 RAD21L1Q9H4I0 556 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 TPT1P8Q9HAU6 139 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 SDR39U1Q9NRG7 319 aaPredicted RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 ZNF701Q9NV72 531 aaPredicted RBP8.29□□□□□ -1.08
YBX3-218ENST00000546298 P2RX2Q9UBL9 471 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 PRSS50Q9UI38 385 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 OSGIN1Q9UJX0 560 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 ZNF232Q9UNY5 417 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 LAMP3Q9UQV4 416 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 TMED7Q9Y3B3 224 aa8.29□□□□□ -1.08
YBX3-218ENST00000546298 A0A1W2PP18 115 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 CIB4A0PJX0 185 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 CCT8L1PA6NM43 557 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 CLDN24A6NM45 220 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 ZNF716A6NP11 495 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 H7C1Q1 480 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 BCAS1O75363 584 aaPredicted RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 LYZL6O75951 148 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 PGM3O95394 542 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 HEXAP06865 529 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 HOXB4P17483 251 aaPredicted RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 RPS4Y1P22090 263 aaKnown RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 IGHV1-2P23083 117 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 CXCR1P25024 350 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 POLR2JP52435 117 aaKnown RBP8.28□□□□□ -1.08
YBX3-218ENST00000546298 DSTNP60981 165 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 STX1BP61266 288 aa8.28□□□□□ -1.08
YBX3-218ENST00000546298 EPS8Q12929 822 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms