RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ASB4Q9Y574 426 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 MMP24Q9Y5R2 645 aa3.55□□□□□ -1.84
SNHG1-220ENST00000544550 LOC105371242A0A075B767 164 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 A0A0G2JMP0 313 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 A0A0X1KG70 313 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CIB4A0PJX0 185 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 C1orf226A1L170 272 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 NCF1BA6NI72 391 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 WASHC1A8K0Z3 465 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 NCF1CA8MVU1 366 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TMEM233B4DJY2 109 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 DIRC3C9JPN6 131 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 GOLGA6L19H0YKK7 550 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 J3QLI3 93 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 M0QYG6 137 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 RGS14O43566 566 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TMPRSS11DO60235 418 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SHOX2O60902 331 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SH3BGRLO75368 114 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 RAD51DO75771 328 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TTC4O95801 387 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 NUDT17P0C025 328 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CT45A8P0DMV1 189 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CT45A9P0DMV2 189 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 NCF1P14598 390 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 PGCP20142 388 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 GATA3P23771 443 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ELK4P28324 431 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SERPINF1P36955 418 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 EMDP50402 254 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF41P51814 821 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 RAB10P61026 200 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 MYBPC1Q00872 1141 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ILF2Q12905 390 aaKnown RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SNX1Q13596 522 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CUL3Q13618 768 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 EXOSC7Q15024 291 aaKnown RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 EFNB3Q15768 340 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CCNG2Q16589 344 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ERCC6LQ2NKX8 1250 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CT45A2Q5DJT8 189 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF362Q5T0B9 420 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CPTPQ5TA50 214 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SAXO2Q658L1 398 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SULT1C3Q6IMI6 304 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 GRHL2Q6ISB3 625 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 LRRC70Q7Z2Q7 622 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 PAGE2Q7Z2X7 111 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 PRUNE1Q86TP1 453 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TRABD2AQ86V40 505 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CNTN4Q8IWV2 1026 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF100Q8IYN0 542 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 C17orf78Q8N4C9 275 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CEP112Q8N8E3 955 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 LRRC57Q8N9N7 239 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 OR7G3Q8NG95 312 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 OR4M2Q8NGB6 313 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 OR52N5Q8NH56 324 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 HUS1BQ8NHY5 278 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 FBXO30Q8TB52 745 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 DUSP19Q8WTR2 217 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ABHD3Q8WU67 409 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 C1orf54Q8WWF1 131 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SLC25A28Q96A46 364 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 MARS2Q96GW9 593 aaKnown RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SNX22Q96L94 193 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 DCLRE1CQ96SD1 692 aaKnown RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 GPA33Q99795 319 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 KCNS3Q9BQ31 491 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TMEM79Q9BSE2 394 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TBL1XR1Q9BZK7 514 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ESM1Q9NQ30 184 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ACSS1Q9NUB1 689 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 MAT2BQ9NZL9 334 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 VSX1Q9NZR4 365 aaPredicted RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 IFNKQ9P0W0 207 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TESQ9UGI8 421 aaKnown RBP3.54□□□□□ -1.84
SNHG1-220ENST00000544550 VDAC3Q9Y277 283 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 AMDHD2Q9Y303 409 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 CHST2Q9Y4C5 530 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 PPIAL4AQ9Y536 164 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 SLC25A15Q9Y619 301 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF780BQ9Y6R6 833 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 DYSFO75923 2080 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 HEATR5BQ9P2D3 2071 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
SNHG1-220ENST00000544550 MGAM2Q2M2H8 2515 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 A0A0J9YW62 118 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 GOLGA6L10A0A0M3HER8 536 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 TCRBV7S3A2A0A539 114 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 ZNF724A8MTY0 619 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 B4DXG7 233 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 CLDN34H7C241 214 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 KIF2AO00139 706 aaPredicted RBP3.53□□□□□ -1.84
SNHG1-220ENST00000544550 PGRMC2O15173 223 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 FADS1O60427 444 aa3.53□□□□□ -1.84
SNHG1-220ENST00000544550 CCNT2O60583 730 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms