RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
RTN3-212ENST00000543123 ALG2Q9H553 416 aa11.62□□□□□ -0.55
RTN3-212ENST00000543123 CTPS2Q9NRF8 586 aa11.62□□□□□ -0.55
RTN3-212ENST00000543123 AIG1Q9NVV5 245 aa11.62□□□□□ -0.55
RTN3-212ENST00000543123 ING1Q9UK53 422 aaPredicted RBP11.62□□□□□ -0.55
RTN3-212ENST00000543123 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
RTN3-212ENST00000543123 NOSIPQ9Y314 301 aaKnown RBP11.62□□□□□ -0.55
RTN3-212ENST00000543123 CCDC154A6NI56 674 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 SLCO1B7G3V0H7 640 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 HMGN4O00479 90 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 EIF1BO60739 113 aaKnown RBP11.61□□□□□ -0.55
RTN3-212ENST00000543123 KRT75O95678 551 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 PGRP06401 933 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 BST1Q10588 318 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 KLHL17Q6TDP4 642 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
RTN3-212ENST00000543123 RNF130Q86XS8 419 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 ZNF524Q96C55 264 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 MTHFD2LQ9H903 347 aaPredicted RBP11.61□□□□□ -0.55
RTN3-212ENST00000543123 CACYBPQ9HB71 228 aaKnown RBP11.61□□□□□ -0.55
RTN3-212ENST00000543123 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
RTN3-212ENST00000543123 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 TMEM181Q9P2C4 612 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 PRSS50Q9UI38 385 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 TRAPPC4Q9Y296 219 aa11.61□□□□□ -0.55
RTN3-212ENST00000543123 USF3Q68DE3 2245 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 C9JVG2 144 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 OVOL3O00110 214 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 FAAHO00519 579 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 HDAC3O15379 428 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 MRPL33O75394 65 aaKnown RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 NR2F1P10589 423 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 IDO1P14902 403 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 IL7RP16871 459 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 IDUAP35475 653 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 POLR2HP52434 150 aaKnown RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 SLC16A1P53985 500 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 CDH11P55287 796 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 PHC1P78364 1004 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 SLC35A1P78382 337 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 CHRNEQ04844 493 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 FUT5Q11128 374 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 VEZF1Q14119 521 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 TNFAIP8L3Q5GJ75 292 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 OLIG3Q7RTU3 272 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 PEX5LQ8IYB4 626 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ANKRD42Q8N9B4 389 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 WDR60Q8WVS4 1066 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ZNF75CPQ92670 426 aaPredicted RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 ZNF775Q96BV0 537 aaPredicted RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 TRIM2Q9C040 744 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 PNPOQ9NVS9 261 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 PARPBPQ9NWS1 579 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 TAS2R16Q9NYV7 291 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 SLC9A8Q9Y2E8 581 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
RTN3-212ENST00000543123 FREM1Q5H8C1 2179 aa11.6□□□□□ -0.55
RTN3-212ENST00000543123 TMED7-TICAM2A0A0A6YYA0 188 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 CFAP73A6NFT4 308 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 CCT8L1PA6NM43 557 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 SDHDO14521 159 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 RFXANKO14593 260 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 ZNF208O43345 1280 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 PGM3O95394 542 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 IL6P05231 212 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 ALDOCP09972 364 aaKnown RBP11.59□□□□□ -0.55
RTN3-212ENST00000543123 DANCRP0C864 163 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 IGHV1-2P23083 117 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 SLC1A3P43003 542 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 NME5P56597 212 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 OR2B6P58173 313 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 UFM1P61960 85 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 ZSWIM7Q19AV6 140 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 C1QTNF12Q5T7M4 302 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 SEZ6L2Q6UXD5 910 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 DEPDC4Q8N2C3 294 aa11.59□□□□□ -0.55
RTN3-212ENST00000543123 ZNF433Q8N7K0 673 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms