RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SOD3P08294 240 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 DANCRP0C864 163 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 BMP4P12644 408 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 PTAFRP25105 342 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 CDKN1AP38936 164 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 MAP2K6P52564 334 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 CASP9P55211 416 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 OR2B6P58173 313 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 SLC35A1P78382 337 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 TNK1Q13470 666 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 FAM174BQ3ZCQ3 159 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 SPANXN4Q5MJ08 99 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 MREGQ8N565 214 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 FAM71CQ8NEG0 241 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 PAIP2Q9BPZ3 127 aaKnown RBP13.53□□□□□ -0.24
UBE3B-211ENST00000539843 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 TAS2R16Q9NYV7 291 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 UPB1Q9UBR1 384 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 BTNL2Q9UIR0 455 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 ROS1P08922 2347 aa13.53□□□□□ -0.24
UBE3B-211ENST00000539843 NSD1Q96L73 2696 aaPredicted RBP13.53□□□□□ -0.24
UBE3B-211ENST00000539843 TMEM247A6NEH6 219 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 RNF223E7ERA6 249 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 OVOL3O00110 214 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 KRT75O95678 551 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 DHRS4L1P0CG22 281 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 IL7RP16871 459 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 IGHV1-2P23083 117 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 IDH2P48735 452 aaKnown RBP13.52□□□□□ -0.25
UBE3B-211ENST00000539843 POLR2HP52434 150 aaKnown RBP13.52□□□□□ -0.25
UBE3B-211ENST00000539843 TGFBR3Q03167 851 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 CASP8Q14790 479 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 HHATQ5VTY9 493 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 SLC22A25Q6T423 547 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 KLHL24Q6TFL4 600 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 CASP12Q6UXS9 341 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.52□□□□□ -0.25
UBE3B-211ENST00000539843 SPATA19Q7Z5L4 167 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 RNF130Q86XS8 419 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF440Q8IYI8 595 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 WDR60Q8WVS4 1066 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 CCDC115Q96NT0 180 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 TRNT1Q96Q11 434 aaKnown RBP13.52□□□□□ -0.25
UBE3B-211ENST00000539843 REG4Q9BYZ8 158 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 GRIP2Q9C0E4 1043 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 SAP130Q9H0E3 1048 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 MEAF6Q9HAF1 191 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 TMEM181Q9P2C4 612 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 KCNE5Q9UJ90 142 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
UBE3B-211ENST00000539843 TRAPPC4Q9Y296 219 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 SLC9A8Q9Y2E8 581 aa13.52□□□□□ -0.25
UBE3B-211ENST00000539843 VPS13CQ709C8 3753 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 CENPVL1A0A0U1RR11 272 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 FAM234BA2RU67 622 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF208O43345 1280 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 PGM3O95394 542 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 IGHV3-9P01782 118 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 NR2F1P10589 423 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 CCNA2P20248 432 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 BGNP21810 368 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 SLC16A1P53985 500 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 COPZ1P61923 177 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 CHRNEQ04844 493 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 MAPK14Q16539 360 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 CEP85LQ5SZL2 805 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 C1QTNF12Q5T7M4 302 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 OGFOD2Q6N063 350 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 LRRC74BQ6ZQY2 392 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF621Q6ZSS3 439 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 OLIG3Q7RTU3 272 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 PEX5LQ8IYB4 626 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 FBXL14Q8N1E6 418 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF433Q8N7K0 673 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-211ENST00000539843 GLB1L3Q8NCI6 653 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-211ENST00000539843 LILRB1Q8NHL6 650 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-211ENST00000539843 RHNO1Q9BSD3 238 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 TRAF4Q9BUZ4 470 aaPredicted RBP13.51□□□□□ -0.25
UBE3B-211ENST00000539843 SLCO5A1Q9H2Y9 848 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 ARMC7Q9H6L4 198 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 CALML5Q9NZT1 146 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
UBE3B-211ENST00000539843 USF3Q68DE3 2245 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 TMED7-TICAM2A0A0A6YYA0 188 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 CFAP73A6NFT4 308 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 CCDC154A6NI56 674 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 HMGN4O00479 90 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 SCN2BO60939 215 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 ANP32DO95626 131 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 PGRP06401 933 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 DBIP07108 87 aaKnown RBP13.5□□□□□ -0.25
UBE3B-211ENST00000539843 NUDT6P53370 316 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 NME5P56597 212 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 ABHD12BQ7Z5M8 362 aaPredicted RBP13.5□□□□□ -0.25
UBE3B-211ENST00000539843 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
UBE3B-211ENST00000539843 C17orf78Q8N4C9 275 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms