RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 PPIAL4CA0A0B4J2A2 164 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 A0A0U1RQS6 177 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 CLDN5O00501 218 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 F10P00742 488 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 OPN1LWP04000 364 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 PPIAL4GP0DN37 164 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF14P17017 642 aaPredicted RBP2.31□□□□□ -2.04
CCDC7-208ENST00000537047 IL10P22301 178 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 YWHABP31946 246 aaKnown RBP2.31□□□□□ -2.04
CCDC7-208ENST00000537047 NRF1Q16656 503 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 SLC10A5Q5PT55 438 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 CASC10Q5T4H9 136 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 ACOT7LQ6ZUV0 252 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 DPY19L4Q7Z388 723 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 TPRA1Q86W33 373 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 GCNT2Q8N0V5 402 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 OR8H1Q8NGG4 311 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 OR51S1Q8NGJ8 323 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 TMEM158Q8WZ71 300 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 FAM111AQ96PZ2 611 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 KCNK16Q96T55 309 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 HIST1H4GQ99525 98 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 KLHDC3Q9BQ90 382 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 RHOJQ9H4E5 214 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 ECT2Q9H8V3 914 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 NGBQ9NPG2 151 aa2.31□□□□□ -2.04
CCDC7-208ENST00000537047 C6orf203Q9P0P8 240 aaPredicted RBP2.31□□□□□ -2.04
CCDC7-208ENST00000537047 IGHV2-70DA0A0C4DH43 119 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 A0A0U1RQV5 110 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 GSAPA4D1B5 854 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 HIP1O00291 1037 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 PRKYO43930 277 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 OR10H3O60404 316 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 RETP07949 1114 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 IGFBP3P17936 291 aaPredicted RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 ATP6V1B2P21281 511 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 PRKXP51817 358 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 ACTA1P68133 377 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 NUCB2P80303 420 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 CSTF1Q05048 431 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 CEBPEQ15744 281 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 SLC5A12Q1EHB4 618 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 C12orf60Q5U649 245 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 GDPD3Q7L5L3 318 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 CATSPER4Q7RTX7 472 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 SVOPLQ8N434 492 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 MRPL43Q8N983 215 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 SELENOMQ8WWX9 145 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 MRPS31Q92665 395 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 RPL3LQ92901 407 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 TSG101Q99816 390 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 NXF5Q9H1B4 397 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 SMYD3Q9H7B4 428 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 EML4Q9HC35 981 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 NUDT15Q9NV35 164 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 RBAKQ9NYW8 714 aaPredicted RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 HOOK1Q9UJC3 728 aaKnown RBP2.3□□□□□ -2.04
CCDC7-208ENST00000537047 V9GY05 133 aa2.3□□□□□ -2.04
CCDC7-208ENST00000537047 CLSPNQ9HAW4 1339 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 A0A0G2JRQ6 117 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 IGHV3-64DA0A0J9YX35 117 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 A0A1B0GUL7 405 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 CCER2I3L3R5 266 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 MSH4O15457 936 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 OR4F21O95013 312 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 IGF1P05019 195 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 RBMY1CP0DJD4 496 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ICAM2P13598 275 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 CRISP2P16562 243 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 DNAJB1P25685 340 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ADRA1AP35348 466 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 LEPP41159 167 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 BIDP55957 195 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 STARD6P59095 220 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 RIPK1Q13546 671 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 LINC01620Q4KN68 170 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ZSCAN25Q6NSZ9 544 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ACP7Q6ZNF0 438 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 COX15Q7KZN9 410 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 DHRSXQ8N5I4 330 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 NKAPP1Q8N9T2 125 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 DUSP18Q8NEJ0 188 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 NANPQ8TBE9 248 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 FANK1Q8TC84 345 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 CHCHD10Q8WYQ3 142 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF578Q96N58 590 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-208ENST00000537047 TMEM237Q96Q45 408 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 SLC6A7Q99884 636 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF2Q9BSG1 426 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-208ENST00000537047 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
CCDC7-208ENST00000537047 SELENOIQ9C0D9 397 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 ROGDIQ9GZN7 287 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 DBNDD1Q9H9R9 158 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 B9D1Q9UPM9 204 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 TRAF3IP3Q9Y228 551 aa2.29□□□□□ -2.04
CCDC7-208ENST00000537047 NCAPD2Q15021 1401 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 PDS5BQ9NTI5 1447 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 KRT87PA6NCN2 255 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 LAD1O00515 517 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms