RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RPP38	P78345	283 aa	Known RBP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	IL1RL1	Q01638	556 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	POU3F1	Q03052	451 aa	Predicted RBP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	ACY1	Q03154	408 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	MESD	Q14696	234 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	MAPK11	Q15759	364 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	WSCD2	Q2TBF2	565 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	KIAA1644	Q3SXP7	199 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	MS4A13	Q5J8X5	152 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	LCN1P1	Q5VSP4	162 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	SLC35E4	Q6ICL7	350 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	DHRS11	Q6UWP2	260 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	C17orf107	Q6ZR85	190 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	FAM92B	Q6ZTR7	304 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	ZDHHC22	Q8N966	263 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	SNX31	Q8N9S9	440 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	TRIM58	Q8NG06	486 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	OR4C15	Q8NGM1	316 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	OR5M9	Q8NGP3	310 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	OR2T11	Q8NH01	316 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	OR1L3	Q8NH93	324 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	FBXO30	Q8TB52	745 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	CXorf40A	Q8TE69	158 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	RNF139	Q8WU17	664 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	TAF15	Q92804	592 aa	Known RBP eCLIP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	LGALS12	Q96DT0	336 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	CITED1	Q99966	193 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	SPX	Q9BT56	116 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	TSPYL1	Q9H0U9	437 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	MMP28	Q9H239	520 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	ZNF624	Q9P2J8	865 aa	Predicted RBP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	C19orf25	Q9UFG5	118 aa	Predicted RBP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	CRCT1	Q9UGL9	99 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	GLS2	Q9UI32	602 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	KCNG2	Q9UJ96	466 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	TRMT6	Q9UJA5	497 aa	Known RBP	3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	ODF2L	Q9ULJ1	636 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	KCNJ14	Q9UNX9	436 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	HS3ST2	Q9Y278	367 aa		3.78	□□□□□ -1.8
ECHDC1-223	ENST00000534442	ANKRD36	A6QL64	1941 aa		3.78	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TMEM129	A0AVI4	362 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC5A10	A0PJK1	596 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SYCE3	A1L190	88 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FAM172BP	A6NC97	362 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC9B1P1	A6NJY1	282 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EPHB6	O15197	1021 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MLNR	O43193	412 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	KRT33A	O76009	404 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LETM1	O95202	739 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	DEXI	O95424	95 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IGLV3-27	P01718	113 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GAP43	P17677	238 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MMP11	P24347	488 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ADORA2B	P29275	332 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ACTR1B	P42025	376 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EFNA3	P52797	238 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ACTR1A	P61163	376 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SCGB2A2	Q13296	93 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF74	Q16587	644 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ARMCX4	Q5H9R4	360 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	RTL6	Q6ICC9	239 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ETFRF1	Q6IPR1	90 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LEKR1	Q6ZMV7	388 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC26A9	Q7LBE3	791 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SVOPL	Q8N434	492 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NEK11	Q8NG66	645 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR5B17	Q8NGF7	314 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CCDC110	Q8TBZ0	833 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PSMF1	Q92530	271 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GGH	Q92820	318 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EEF2KMT	Q96G04	330 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NEDD4L	Q96PU5	975 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LPAR4	Q99677	370 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	WWTR1	Q9GZV5	400 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FAM49B	Q9NUQ9	324 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PANK4	Q9NVE7	773 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC12A6	Q9UHW9	1150 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PSORS1C1	Q9UIG5	152 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PRDM4	Q9UKN5	801 aa		3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	FOXA2	Q9Y261	457 aa	Predicted RBP	3.77	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SPTB	P11277	2137 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	IGHV5-51	A0A0C4DH38	117 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	TRBV4-1	A0A0J9YWV2	114 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	ZNF732	B4DXR9	585 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	KLF11	O14901	512 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	EML2	O95834	649 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	CLPTM1	O96005	669 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	MT-ND2	P03891	347 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	HOXC4	P09017	264 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	SLC25A16	P16260	332 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	USF1	P22415	310 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GNPDA1	P46926	289 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	OR3A3	P47888	321 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	LUM	P51884	338 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	NUCB2	P80303	420 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GTF2B	Q00403	316 aa		3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	GK2	Q14410	553 aa	Predicted RBP	3.76	□□□□□ -1.81
ECHDC1-223	ENST00000534442	PDK1	Q15118	436 aa		3.76	□□□□□ -1.81

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